G1319013


Basic Information

Item Value
gene id G1319013
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 65673203 ~ 65674398 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1505117
CTCTTGCACTTTAATTGggccttgtcagcttggggattcgatccagcaacctttcggttactggcccaacgctctaaccactaggctacctgccgtctagACCTTgtactccaaacacacacacacacacactagtccgcaagcacacacacatgcacacacacatgcacacacacatgcacacacacatgcacacacacatgcacacacactactgctgatTAAGCTTGGCTAATAATACACAAACCAATCTTCTGTAAACCCTCACAAGTAGAAACCTCTTTATAATACAAACCAAAGGCAGAGTGTTCATTCAGACCCCCGTCATGTAAACACTGCCTGTAGTCTCCACAGCATAAAGACAGTCTGGCTCGTTGTCGATAAACACCAcagcttcaagcagaccactttAACACAGGACAGACCACTCTGATACAGGACTGAccactctgatacaggacagaccTCTCTAACACAGGACAGACCACTCTGATACAGGACTGAccactctgatacaggacagaccactctgatac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1505117 True 536 lncRNA 0.48 2 65673203 65674398

Neighbor

gene id symbol gene type direction distance location
LOC110517393 LOC106576623 coding downstream 370069 65268990 ~ 65303134 (-)
LOC110513258 cacna2d4 coding downstream 441540 65153383 ~ 65231663 (-)
LOC118938827 LOC106576471 coding downstream 614560 65021405 ~ 65058643 (-)
LOC118938826 NA coding downstream 658792 64995972 ~ 65014411 (-)
LOC110512490 LOC106592130 coding upstream 203612 65878010 ~ 65892365 (-)
LOC110511373 LOC106592131 coding upstream 218050 65892448 ~ 65898819 (-)
LOC110511371 LOC106597280 coding upstream 227344 65901742 ~ 65979435 (-)
LOC110499707 LOC106609801 coding upstream 307243 65981641 ~ 65986435 (-)
LOC110500955 cpsf6 coding upstream 313534 65987246 ~ 66009466 (-)
G1318995 NA non-coding downstream 21247 65635192 ~ 65651956 (-)
G1319000 NA non-coding downstream 25198 65647272 ~ 65648005 (-)
G1318979 NA non-coding downstream 95736 65552476 ~ 65577467 (-)
G1318976 NA non-coding downstream 120760 65551279 ~ 65552443 (-)
G1318975 NA non-coding downstream 124845 65547570 ~ 65548358 (-)
G1319047 NA non-coding upstream 64352 65738750 ~ 65739255 (-)
G1319069 NA non-coding upstream 111852 65786250 ~ 65824644 (-)
G1319084 NA non-coding upstream 141877 65816275 ~ 65816801 (-)
G1319108 NA non-coding upstream 173125 65847523 ~ 65850192 (-)
G1319095 LOC106576667 non-coding upstream 185697 65860095 ~ 65863881 (-)
G1318935 NA other downstream 200039 65469967 ~ 65473164 (-)
G1318477 NA other downstream 521803 65068277 ~ 65153287 (-)
LOC110499867 LOC106576572 other downstream 1187885 64481916 ~ 64636502 (-)
G1318164 LOC106576481 other downstream 1445528 64216504 ~ 64227675 (-)
G1318092 NA other downstream 1589315 64083037 ~ 64083888 (-)
G1319357 LOC106593594 other upstream 604647 66279045 ~ 66282108 (-)
LOC110490781 LOC106576552 other upstream 1134049 66808409 ~ 66920061 (-)
G1319781 LOC106576551 other upstream 1181781 66856179 ~ 66862281 (-)
G1319847 NA other upstream 1286553 66960951 ~ 66961304 (-)
LOC110511902 LOC106609654 other upstream 1406383 67079306 ~ 67084695 (-)

Expression


Co-expression Network