XLOC_032122



Basic Information


Item Value
gene id XLOC_032122
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 31826335 ~ 31835954 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00064866
GCAGGTAGAGTACATCCATGATATTAGTCCTGCTGGTTTGGTGGAGGGGCTGAATTCCTCTGACTACTGTTCACCTTTCAGAAAAACCTCAGCACCGTCTGAGCTACACCTGACAGCAGCGTTCAGCAAACTGCATCTAGAGTTACCAAGAATCTGCTGCTAGATTTGAGCACGATTCTGTTGACCACAGCATTGACAGGGATATGAGGAATGGAGCTGGGGAAAGCTGGCTTTTACAGGAAGCAAACTGAGcagatgcccttccagctgtactccagtactgggaaacaccaatacactcatacaccatggccaattttgtctacccaattcacctaatccccatctttggactgtgggggaaactggagcacccagaggaaacccatgcgaacatgaggagaacatgcaaactccacacagaaatgccaactggcccagccaggacttgaaccagcaacc

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00064866 True 462 lncRNA 0.49 2 31826335 31835954

Neighbor


gene id symbol gene type direction distance location
XLOC_032121 NA coding upstream 45852 31758398 ~ 31780483 (+)
XLOC_032120 NA coding upstream 390666 31431127 ~ 31435669 (+)
XLOC_032119 jak1 coding upstream 397174 31368071 ~ 31429161 (+)
XLOC_032118 dre-mir-101a coding upstream 460809 31365446 ~ 31365526 (+)
XLOC_032117 NA coding upstream 461119 31362348 ~ 31365216 (+)
XLOC_032123 si:dkey-148h10.5 coding downstream 210248 32046202 ~ 32059110 (+)
XLOC_032124 NA coding downstream 257894 32093848 ~ 32107492 (+)
XLOC_032125 NA coding downstream 302972 32138926 ~ 32147732 (+)
XLOC_032126 NA coding downstream 484776 32320730 ~ 32323767 (+)
XLOC_032127 dock7 coding downstream 490120 32326074 ~ 32404633 (+)
XLOC_032116 NA non-coding upstream 542207 31279331 ~ 31284128 (+)
XLOC_032129 NA non-coding downstream 684145 32520099 ~ 32595157 (+)
XLOC_032132 NA non-coding downstream 1134599 32970553 ~ 33037109 (+)

Expression



Co-expression Network