Gene
RNA
| Item | Value |
|---|---|
| gene id | G1319321 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 66177492 ~ 66178173 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC105008424 isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1505553 | True | 510 | lncRNA | 0.35 | 2 | 66177492 | 66178173 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110499708 | LOC106576651 | coding | downstream | 129593 | 66033061 ~ 66047899 (-) |
| LOC110500955 | cpsf6 | coding | downstream | 168026 | 65987246 ~ 66009466 (-) |
| LOC110499707 | LOC106609801 | coding | downstream | 191057 | 65981641 ~ 65986435 (-) |
| LOC110511371 | LOC106597280 | coding | downstream | 198057 | 65901742 ~ 65979435 (-) |
| LOC110511373 | LOC106592131 | coding | downstream | 278673 | 65892448 ~ 65898819 (-) |
| LOC110519161 | NA | coding | upstream | 235162 | 66413335 ~ 66416251 (-) |
| LOC118938831 | LOC106609809 | coding | upstream | 239281 | 66417454 ~ 66513524 (-) |
| LOC110515929 | ptprr | coding | upstream | 341545 | 66518773 ~ 66553585 (-) |
| LOC110519130 | LOC106609628 | coding | upstream | 386745 | 66564918 ~ 66638625 (-) |
| LOC110501008 | LOC105020375 | coding | upstream | 477025 | 66655198 ~ 66713032 (-) |
| G1319225 | NA | non-coding | downstream | 35227 | 66141834 ~ 66142265 (-) |
| G1319218 | NA | non-coding | downstream | 53950 | 66121288 ~ 66123542 (-) |
| G1319215 | NA | non-coding | downstream | 59400 | 66117417 ~ 66118092 (-) |
| G1319213 | NA | non-coding | downstream | 61849 | 66115176 ~ 66115643 (-) |
| G1319189 | NA | non-coding | downstream | 116732 | 66059290 ~ 66060760 (-) |
| G1319331 | NA | non-coding | upstream | 12716 | 66190889 ~ 66191534 (-) |
| G1319340 | NA | non-coding | upstream | 34552 | 66212725 ~ 66213600 (-) |
| G1319358 | LOC106599552 | non-coding | upstream | 87427 | 66265600 ~ 66266175 (-) |
| G1319365 | NA | non-coding | upstream | 121276 | 66299449 ~ 66299659 (-) |
| G1319366 | NA | non-coding | upstream | 124344 | 66302517 ~ 66304437 (-) |
| G1318935 | NA | other | downstream | 704328 | 65469967 ~ 65473164 (-) |
| G1318477 | NA | other | downstream | 1026092 | 65068277 ~ 65153287 (-) |
| LOC110499867 | LOC106576572 | other | downstream | 1692174 | 64481916 ~ 64636502 (-) |
| G1318164 | LOC106576481 | other | downstream | 1949817 | 64216504 ~ 64227675 (-) |
| G1318092 | NA | other | downstream | 2093604 | 64083037 ~ 64083888 (-) |
| G1319357 | LOC106593594 | other | upstream | 100872 | 66279045 ~ 66282108 (-) |
| LOC110490781 | LOC106576552 | other | upstream | 630274 | 66808409 ~ 66920061 (-) |
| G1319781 | LOC106576551 | other | upstream | 678006 | 66856179 ~ 66862281 (-) |
| G1319847 | NA | other | upstream | 782778 | 66960951 ~ 66961304 (-) |
| LOC110511902 | LOC106609654 | other | upstream | 902608 | 67079306 ~ 67084695 (-) |
