Gene
RNA
| Item | Value |
|---|---|
| gene id | G1319373 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 66317793 ~ 66318138 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1505619 | True | 346 | lncRNA | 0.47 | 1 | 66317793 | 66318138 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110499708 | LOC106576651 | coding | downstream | 269894 | 66033061 ~ 66047899 (-) |
| LOC110500955 | cpsf6 | coding | downstream | 308327 | 65987246 ~ 66009466 (-) |
| LOC110499707 | LOC106609801 | coding | downstream | 331358 | 65981641 ~ 65986435 (-) |
| LOC110511371 | LOC106597280 | coding | downstream | 338358 | 65901742 ~ 65979435 (-) |
| LOC110511373 | LOC106592131 | coding | downstream | 418974 | 65892448 ~ 65898819 (-) |
| LOC110519161 | NA | coding | upstream | 95197 | 66413335 ~ 66416251 (-) |
| LOC118938831 | LOC106609809 | coding | upstream | 99316 | 66417454 ~ 66513524 (-) |
| LOC110515929 | ptprr | coding | upstream | 201580 | 66518773 ~ 66553585 (-) |
| LOC110519130 | LOC106609628 | coding | upstream | 246780 | 66564918 ~ 66638625 (-) |
| LOC110501008 | LOC105020375 | coding | upstream | 337060 | 66655198 ~ 66713032 (-) |
| G1319371 | NA | non-coding | downstream | 6343 | 66311027 ~ 66311450 (-) |
| G1319369 | NA | non-coding | downstream | 7800 | 66309789 ~ 66309993 (-) |
| G1319366 | NA | non-coding | downstream | 13356 | 66302517 ~ 66304437 (-) |
| G1319365 | NA | non-coding | downstream | 18134 | 66299449 ~ 66299659 (-) |
| G1319358 | LOC106599552 | non-coding | downstream | 51618 | 66265600 ~ 66266175 (-) |
| G1319374 | NA | non-coding | upstream | 632 | 66318770 ~ 66319005 (-) |
| G1319399 | NA | non-coding | upstream | 62059 | 66380197 ~ 66380647 (-) |
| G1319406 | NA | non-coding | upstream | 85399 | 66403537 ~ 66404855 (-) |
| G1319407 | NA | non-coding | upstream | 91095 | 66409233 ~ 66409499 (-) |
| G1319554 | NA | non-coding | upstream | 92261 | 66410399 ~ 66410728 (-) |
| G1319357 | LOC106593594 | other | downstream | 35685 | 66279045 ~ 66282108 (-) |
| G1318935 | NA | other | downstream | 844629 | 65469967 ~ 65473164 (-) |
| G1318477 | NA | other | downstream | 1166393 | 65068277 ~ 65153287 (-) |
| LOC110499867 | LOC106576572 | other | downstream | 1832475 | 64481916 ~ 64636502 (-) |
| G1318164 | LOC106576481 | other | downstream | 2090118 | 64216504 ~ 64227675 (-) |
| LOC110490781 | LOC106576552 | other | upstream | 490309 | 66808409 ~ 66920061 (-) |
| G1319781 | LOC106576551 | other | upstream | 538041 | 66856179 ~ 66862281 (-) |
| G1319847 | NA | other | upstream | 642813 | 66960951 ~ 66961304 (-) |
| LOC110511902 | LOC106609654 | other | upstream | 762643 | 67079306 ~ 67084695 (-) |
| G1320139 | NA | other | upstream | 874978 | 67193116 ~ 67193493 (-) |
