G1319406


Basic Information

Item Value
gene id G1319406
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 66403537 ~ 66404855 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1505654
ACTATTACTCATCATTATGCAGCAGGCGTTTTAAATGGATTGGCTTTATAAAAAAACATTCTCTTTCCAACACAAAATATATTAGTTTAGTACTACTGTTACAGCTCCTATTGTAAGAGGACATAACCTCCCCTGGAGCTGCCTCTTACTGCAATCACATGTTCAGCATATGGCTTTATGTATGAAATATCATTCCTCTTTTAGCCAAGGACAACAACGTCTTAGCTACTTCTGTTGTAGAAAATGCACAAGTGAATACTCCTGTACGTCCGATTAACGCAGTCGAGAGCAAACCTTTTCTTGGAGCAGGGTAGGTAGGTGTAACGATTTGTAGTCAGATCACATTCTTCTCTTATCCAATCGGATGGAAAACACTAACTGGATGTACTAGCTGTTCAAACCAATCGGAGAGCGGTAACACAAACGGACGACAAACTATTCAAACCAATCGGAGAGCGGTAACACAAACGGACGACAAACTATTCAAACCAATCGGAGAGCGGTAACACAAACGGACGACAAACTATTCAAACCAATCGGAGAGCGGTAACACAAACGGACGACAAACTATTCAAACCAATCGGAGAGCGGTAACTCATACGGACGACAAACTATTCAAACCAATCGGAGAGCGGTAACACAAACGGACGACAAACTATTCAAACCAATCAGAAAGCGGTAACTCATACGGACAACAAACTATTCAAACCAATCGGAGAGCGGTAACTCATACGGACGACAAACTATTCAAACCAATCAGAAAGCGGTAACTCATACGGACAACAAACTATTCAAACCAATCGGAGAGCGGTAACTCATACGGACGACAAACTATTCAAACCAATCGGAGAGCGGTAACTCATACGGACGACAAACTATTCAAACCAATCGGAGAGCGGTAACTCAAACGGACTACAAACTATTCAAACCAATCGGAGAGCGGTAACTCATACGGACAACAAACTATTCAAACCAATTGGAGAGCGGTAACTCATACGGACGACAAACTATTCAAAACGATGCAAAAGTCTGCTACTGTGGTAAGAAAACACATTCAATTTGCATCGTGAAAAAAACTAAAACCACTAACTGACAGAAGGTAAGGCAGAAGACAGACTGCAGAGGAAGTTGCTACAGTCAAGGCATCTGCACATCTATCCAACCACAGACAAACTACCTATCCCAGGTTTTGTCCCGAACCCAGACCAACTGTCCGTGGCCCAGTCTACATATTGAACCCAGACCAACTGTCTGTGGCCCAGTCTACATATTTAACCCAGACCAACTGTCCGTGGCCCAGTCTACATATTGAACCCAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1505654 True 1319 lncRNA 0.43 1 66403537 66404855

Neighbor

gene id symbol gene type direction distance location
LOC110499708 LOC106576651 coding downstream 355638 66033061 ~ 66047899 (-)
LOC110500955 cpsf6 coding downstream 394071 65987246 ~ 66009466 (-)
LOC110499707 LOC106609801 coding downstream 417102 65981641 ~ 65986435 (-)
LOC110511371 LOC106597280 coding downstream 424102 65901742 ~ 65979435 (-)
LOC110511373 LOC106592131 coding downstream 504718 65892448 ~ 65898819 (-)
LOC110519161 NA coding upstream 8480 66413335 ~ 66416251 (-)
LOC118938831 LOC106609809 coding upstream 12599 66417454 ~ 66513524 (-)
LOC110515929 ptprr coding upstream 114863 66518773 ~ 66553585 (-)
LOC110519130 LOC106609628 coding upstream 160063 66564918 ~ 66638625 (-)
LOC110501008 LOC105020375 coding upstream 250343 66655198 ~ 66713032 (-)
G1319399 NA non-coding downstream 22890 66380197 ~ 66380647 (-)
G1319374 NA non-coding downstream 84532 66318770 ~ 66319005 (-)
G1319373 NA non-coding downstream 85399 66317793 ~ 66318138 (-)
G1319371 NA non-coding downstream 92087 66311027 ~ 66311450 (-)
G1319369 NA non-coding downstream 93544 66309789 ~ 66309993 (-)
G1319407 NA non-coding upstream 4378 66409233 ~ 66409499 (-)
G1319554 NA non-coding upstream 5544 66410399 ~ 66410728 (-)
G1319555 NA non-coding upstream 6177 66411032 ~ 66411905 (-)
G1319564 NA non-coding upstream 7094 66411949 ~ 66413139 (-)
G1319357 LOC106593594 other downstream 121429 66279045 ~ 66282108 (-)
G1318935 NA other downstream 930373 65469967 ~ 65473164 (-)
G1318477 NA other downstream 1252137 65068277 ~ 65153287 (-)
LOC110499867 LOC106576572 other downstream 1918219 64481916 ~ 64636502 (-)
G1318164 LOC106576481 other downstream 2175862 64216504 ~ 64227675 (-)
LOC110490781 LOC106576552 other upstream 403592 66808409 ~ 66920061 (-)
G1319781 LOC106576551 other upstream 451324 66856179 ~ 66862281 (-)
G1319847 NA other upstream 556096 66960951 ~ 66961304 (-)
LOC110511902 LOC106609654 other upstream 675926 67079306 ~ 67084695 (-)
G1320139 NA other upstream 788261 67193116 ~ 67193493 (-)

Expression


Co-expression Network