G1319589


Basic Information

Item Value
gene id G1319589
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 66477813 ~ 66478369 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1505891
atcagagacagtcattatagctgtatcagagacagtcattattactgtatcagagacagtcattatcgctgtatcagagacagtcattatcgctgtatcagagacagtcattatcgctgtatcagagacagtcattatcactgtatcagagacagtcattatcgctgtatcagagacagtcattatagctgtatcagagacagtcattattactgtatcagagacagtcattatcgctgtatcagagacagtcattatcactgtatcagagacagtcattattaCTGTGTCAGAGATAGTCATTATtactgtatcagagacagtcagtatcactgtatcagagacagtcataATTACTGTATCAGAGATATTCATTAtcactgtatcagagacagtcattattaCTGTGTCAGAGAAAGTCATTATTACTGTATCATagacagtcattatcactgtatcagagacagtcattatcgctgtatcagagacagtcattatcactgtatCAGAGTCATTCATTATCACTTtgtcagagacagtcattatcactgtgtCAG

Function

NR:

description
PREDICTED: uncharacterized protein LOC106592766 isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1505891 True 557 lncRNA 0.37 1 66477813 66478369

Neighbor

gene id symbol gene type direction distance location
LOC110519161 NA coding downstream 61661 66413335 ~ 66416251 (-)
LOC110499708 LOC106576651 coding downstream 429914 66033061 ~ 66047899 (-)
LOC110500955 cpsf6 coding downstream 468347 65987246 ~ 66009466 (-)
LOC110499707 LOC106609801 coding downstream 491378 65981641 ~ 65986435 (-)
LOC110511371 LOC106597280 coding downstream 498378 65901742 ~ 65979435 (-)
LOC110515929 ptprr coding upstream 41349 66518773 ~ 66553585 (-)
LOC110519130 LOC106609628 coding upstream 86549 66564918 ~ 66638625 (-)
LOC110501008 LOC105020375 coding upstream 176829 66655198 ~ 66713032 (-)
LOC110490781 LOC106576552 coding upstream 330040 66808409 ~ 66920061 (-)
LOC110490597 LOC106609625 coding upstream 445673 66924042 ~ 66940668 (-)
G1319566 NA non-coding downstream 48948 66427794 ~ 66428865 (-)
G1319564 NA non-coding downstream 64674 66411949 ~ 66413139 (-)
G1319555 NA non-coding downstream 65908 66411032 ~ 66411905 (-)
G1319554 NA non-coding downstream 67085 66410399 ~ 66410728 (-)
G1319595 NA non-coding upstream 29441 66507810 ~ 66508351 (-)
G1319560 NA non-coding upstream 35910 66514279 ~ 66516219 (-)
G1319563 NA non-coding upstream 39363 66517732 ~ 66518664 (-)
G1319602 NA non-coding upstream 66559 66544928 ~ 66547948 (-)
G1319357 LOC106593594 other downstream 195705 66279045 ~ 66282108 (-)
G1318935 NA other downstream 1004649 65469967 ~ 65473164 (-)
G1318477 NA other downstream 1326413 65068277 ~ 65153287 (-)
LOC110499867 LOC106576572 other downstream 1992495 64481916 ~ 64636502 (-)
G1318164 LOC106576481 other downstream 2250138 64216504 ~ 64227675 (-)
G1319781 LOC106576551 other upstream 377810 66856179 ~ 66862281 (-)
G1319847 NA other upstream 482582 66960951 ~ 66961304 (-)
LOC110511902 LOC106609654 other upstream 602412 67079306 ~ 67084695 (-)
G1320139 NA other upstream 714747 67193116 ~ 67193493 (-)

Expression


Co-expression Network