G1319563


Basic Information

Item Value
gene id G1319563
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 66517732 ~ 66518664 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1505863
ctcccaaggatgaaccagacttgtggaggtctacaatttttttctgaggtcttggctgatttattttgattttcccatgatgttaatcaaagaggcactgagtttgaaggtaggccttgaaatacgtccacaggtacacctccaattgactcacatgatgtcaattagcctatcagaagcttctaaagccatgacataattttctggaattttccaagctgtttaaaggcacagtcaacatagtgtatgtaaacttctgactcactggaattgtgatacagtgaattataagtgaaataatctgtctgtaaacaattgttggaaaaaattacttgtgtcatgcacaaagtagatgtcctaaccgacttgccaaaaatatagtttattaacaagaaatttgtggagtggttgaaaaatgacttttaatgactccaacaacctaagtgtatgtaaacttccgacttcaactgtagactgGACATGACTCCCTTCAAACTTTTCTGGTAATTCCTAAAAAATCTGAAGTGAGTTGCACAATTACTAGCTTTGAATCCCATCCTGAATAGCGCGCCATTTCACTATGGTCTCACTGGTGAAGCAGAGTAGTATTCAGGGTGGACTCTAGACAAAACAAATACCCCTCCCTGCTCCTTCCTCTTCAAACAAGACATCCTTGAGGTCATTTCCTTAACTCCACCAGGGTTTTCTAACTCAACAAGACGATTCCCACAAACAGCCAAAGTTATTCGCGTGAAAGCTGCTTGCCCAAACAGATCATGATTTATAATAGTTTAGTAGCCTGGAACCTCAAACTGAATTTATCACTATTTCACTGAAACAGCAGGGAAACAGAGTAATATCTGTGCTCCGGGCTCGGGTTTTAGTGATCAATAGCCGGACGGTCTATAATCTACATTATGCTTCTCTTCGTGT
>TU1505864
ctcccaaggatgaaccagacttgtggaggtctacaatttttttctgaggtcttggctgatttattttgattttcccatgatgttaatcaaagaggcactgagtttgaaggtaggccttgaaatacgtccacaggtacacctccaattgactcacatgatgtcaattagcctatcagaagcttctaaagccatgacataattttctggaattttccaagctgtttaaaggcacagtcaacatagtgtatgtaaacttctgactcactggaattgtgatacagtgaattataagtgaaataatctgtctgtaaacaattgttggaaaaaattacttgtgtcatgcacaaagtagatgtcctaaccgacttgccaaaaatatagtttattaacaagaaatttgtggagtggttgaaaaatgacttttaatgactccaacaacctaagtgtatgtaaacttccgacttcaactgtagactgGACATGACTCCCTTCAAACTTTTCTGGTAATTCCTAAAAAATCTGAAGTGAGTTGCACAATTACTAGCTTTGAATCCCATCCTGAATAGCGCGCCATTTCACTATGGTCTCACTGGTGAAGCAGAGTAGTATTCAGGGTGGACTCTAGACAAAACAAATACCCCTCCCTGCTCCTTCCTCTTCAAACAAGACATCCTTGAGGTCATTTCCTTAACTCCACCAGGGTTTTCTAACTCAACAAGACGATTCCCACAAACAGCCAAAGTTATTCGCGTGAAAGCTGCTTGCCCAAACAGATCATGATTTATAATAGTTTAGTAGCCTGGAACCTCAAACTGAATTTATCACT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1505863 False 933 lncRNA 0.39 1 66517732 66518664
TU1505864 True 826 lncRNA 0.39 1 66517839 66518664

Neighbor

gene id symbol gene type direction distance location
LOC118938831 LOC106609809 coding downstream 4208 66417454 ~ 66513524 (-)
LOC110519161 NA coding downstream 101580 66413335 ~ 66416251 (-)
LOC110499708 LOC106576651 coding downstream 469833 66033061 ~ 66047899 (-)
LOC110500955 cpsf6 coding downstream 508266 65987246 ~ 66009466 (-)
LOC110499707 LOC106609801 coding downstream 531297 65981641 ~ 65986435 (-)
LOC110515929 ptprr coding upstream 1054 66518773 ~ 66553585 (-)
LOC110519130 LOC106609628 coding upstream 46254 66564918 ~ 66638625 (-)
LOC110501008 LOC105020375 coding upstream 136534 66655198 ~ 66713032 (-)
LOC110490781 LOC106576552 coding upstream 289745 66808409 ~ 66920061 (-)
LOC110490597 LOC106609625 coding upstream 405378 66924042 ~ 66940668 (-)
G1319560 NA non-coding downstream 1513 66514279 ~ 66516219 (-)
G1319595 NA non-coding downstream 9381 66507810 ~ 66508351 (-)
G1319589 NA non-coding downstream 39363 66477813 ~ 66478369 (-)
G1319566 NA non-coding downstream 88867 66427794 ~ 66428865 (-)
G1319602 NA non-coding upstream 26264 66544928 ~ 66547948 (-)
G1319559 NA non-coding upstream 33173 66551837 ~ 66562591 (-)
G1319620 NA non-coding upstream 98432 66617096 ~ 66617707 (-)
G1319357 LOC106593594 other downstream 235624 66279045 ~ 66282108 (-)
G1318935 NA other downstream 1044568 65469967 ~ 65473164 (-)
G1318477 NA other downstream 1366332 65068277 ~ 65153287 (-)
LOC110499867 LOC106576572 other downstream 2032414 64481916 ~ 64636502 (-)
G1318164 LOC106576481 other downstream 2290057 64216504 ~ 64227675 (-)
G1319781 LOC106576551 other upstream 337515 66856179 ~ 66862281 (-)
G1319847 NA other upstream 442287 66960951 ~ 66961304 (-)
LOC110511902 LOC106609654 other upstream 562117 67079306 ~ 67084695 (-)
G1320139 NA other upstream 674452 67193116 ~ 67193493 (-)

Expression


Co-expression Network