G1319602


Basic Information

Item Value
gene id G1319602
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 66544928 ~ 66547948 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1505907
AGCTCAAAGAGGACGTGCAACATGACTGGATTCCACAGGAGGGCGCCATCTCCCATgttattgtacatgttgtagactatatcactcagcccTCTCCCATGTTATTGTacatgttgtagactatatcactcagccatctcccatgttgtagactatatcactcagccatctcccatgttgttgtagactatatcactcagccatctcccatgttattgtacatgttgtagactatatcactcagcccTCTCCCATGTTATTGTacatgttgtagactatatcactcagccatctcccatgttgtagactatatcactcagccatctcccatgttgttgtagactatatcactcagccatctcccatgttattgtacatgttgtagactatatcactcagccatctcccatgttattgtacatgttgtagactatatcactcagccatctcccatgttgttgtacatgttgtagactatatcactcagccatctcccatgttgtagactatatcactcagccatctcccatgttattgtacatgttgtagactatatcactcagccatctcccatgttgtagactatatcactcagccatctcccatgttattgtacatgttgtagactatatcactcagcccTCTCCAACAGAACTATGTTTCACATCCACAAGAGGGCATGCATATCACAATATCACAATATCACAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1505907 True 708 lncRNA 0.42 2 66544928 66547948

Neighbor

gene id symbol gene type direction distance location
LOC118938831 LOC106609809 coding downstream 31404 66417454 ~ 66513524 (-)
LOC110519161 NA coding downstream 128776 66413335 ~ 66416251 (-)
LOC110499708 LOC106576651 coding downstream 497029 66033061 ~ 66047899 (-)
LOC110500955 cpsf6 coding downstream 535462 65987246 ~ 66009466 (-)
LOC110499707 LOC106609801 coding downstream 558493 65981641 ~ 65986435 (-)
LOC110519130 LOC106609628 coding upstream 16970 66564918 ~ 66638625 (-)
LOC110501008 LOC105020375 coding upstream 107250 66655198 ~ 66713032 (-)
LOC110490781 LOC106576552 coding upstream 260461 66808409 ~ 66920061 (-)
LOC110490597 LOC106609625 coding upstream 376094 66924042 ~ 66940668 (-)
LOC110490598 LOC106576550 coding upstream 392792 66940740 ~ 66942750 (-)
LOC110515929 ptprr non-coding downstream 18648 66518773 ~ 66553585 (-)
G1319563 NA non-coding downstream 26264 66517732 ~ 66518664 (-)
G1319560 NA non-coding downstream 28709 66514279 ~ 66516219 (-)
G1319595 NA non-coding downstream 36577 66507810 ~ 66508351 (-)
G1319589 NA non-coding downstream 66559 66477813 ~ 66478369 (-)
G1319559 NA non-coding upstream 3889 66551837 ~ 66562591 (-)
G1319620 NA non-coding upstream 69148 66617096 ~ 66617707 (-)
G1319793 NA non-coding upstream 240897 66788845 ~ 66792001 (-)
G1319357 LOC106593594 other downstream 262820 66279045 ~ 66282108 (-)
G1318935 NA other downstream 1071764 65469967 ~ 65473164 (-)
G1318477 NA other downstream 1393528 65068277 ~ 65153287 (-)
LOC110499867 LOC106576572 other downstream 2059610 64481916 ~ 64636502 (-)
G1318164 LOC106576481 other downstream 2317253 64216504 ~ 64227675 (-)
G1319781 LOC106576551 other upstream 308231 66856179 ~ 66862281 (-)
G1319847 NA other upstream 413003 66960951 ~ 66961304 (-)
LOC110511902 LOC106609654 other upstream 532833 67079306 ~ 67084695 (-)
G1320139 NA other upstream 645168 67193116 ~ 67193493 (-)

Expression


Co-expression Network