XLOC_032128 (kank4)


Basic Information

Item Value
gene id XLOC_032128
gene name kank4
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 32410848 ~ 32507298 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00062791
ACCCAACGAAGGGGACCAGGCTCTCGCGCTTCTCGCAGTGTACACCACGCAGTCTAACAGAATGCAGGCACACCAGCCCTGGGAAGAAGCCTGGAGTCTGGAAATGCGAAGAAATAGAGCAGCGAGCTCAAGAATGAGAGGCATGTCCTGTACTCTTTCAGCCCCAGCTGAGCTGTGctgttttttaaatcactttaccACACTAAACCCTCCTCAGTATCAGtgacacacacactacactccAGCtggacacacatacacatgtcaGTGCAAAGCTCAAGCAGCATACATATTGTATAGGCAATGTGGATAAACAACAGCATAATCTTTTAGCATGCACTACTTTAATCCTATAGCATCTGAACATGATGGGGATCTGTATGGGGGTGTtggctgctgctgctgatgtgtgtgtgttagtgtgcctGACCCTGCGTCTGCCATTGGATGAGCTCTGTGGAGGGAGGTGTGTTCAGCCTCACAGTATAGCGCTTGTTATGAGAGCCTTCTGCCGTCCCCTTCCACAAACCTCAATAACAATATCGCAGAGGctgagtgagtgtgagtgtgtgtgtt
>TCONS_00062792
CATATATTTGGCCAAAATGattgactatttatttttatttgtttatttattttgttgtattgcTAAACAGAACAATTTAAATACAATGCATACATAATTATGTAATAAAAAGAACTTCAAGTAAAACATACATTCTACTTATATGAGTGTAGCTGATTAAATGCACCTCTTCTCATTCCCTACAGTGTACACCACGCAGTCTAACAGAATGCAGGCACACCAGCCCTGGGAAGAAGCCTGGAGTCTGGAAATGCGAAGAAATAGAGCAGCGAGCTCAAGAATGAGAGGCATGTCCTGTACTCTTTCAGCCCCAGCTGAGCTGTGctgttttttaaatcactttaccACACTAAACCCTCCTCAGTATCAGtgacacacacactacactccAGCtggacacacatacacatgtcaGTGCAAAGCTCAAGCAGCATACATATTGTATAGGCAATGTGGATAAACAACAGCATAATCTTTTAGCATGCACTACTTTAATCCTATAGCATCTGAACATGATGGGGATCTGTATGGGGGTGTtggctgctgctgctgatgtgtgtgtgttagtgtgcctGACCCTGCGTCTGCCATTGGATGAGCTCTGTGGAGGGAGGTGTGTTCAGCCTCACAGTATAGCGCTTGTTATGAGAGCCTTCTGCCGTCCCCTTCCACAAACCTCAATAACAATATCGCAGAGGctgagtgagtgtgagtgtgtgtgttgaggaGTGTGTAGCAccattgctgctgctgctgctgcctgcGGCTTCCTCCCTGTGCTGGATATTCCTTGAAGGTCTGCCTCACCTCTGCAGTGCCTGGGAAAAAATAGAGGGACCCTAAGAGACTGAGGTTGAAGTTCAAAGAAAGGAAGGGAGGGGTGTTGCATGTTTTTGGTAGACGGGGAGGGGAGCAGGATTCACAGCACATGCTAGGTTTCTAGTGTTTACATCAGATCCCACTCATGAGActgcaaaaacagaaataatggaCAAGAAAAGTGCAAATGGCTTTGCTACTAAAGCCTCTGAGAGTGGAGTACAGCGAAAACAGCTGCCATATTCTGTAGAGACCCCCTATGGGTTTCACTTGGATCTGGACTTCCTGAAGTACGTAGATGACATAGAGAAAGGGAACACAATCAAGAGGGTGCACATTCAACGTAAAAACAGGGGTCCAAAGTACAGCACACTGCCTCGCAACTTCAGCCTTCCTGGGCATGGCGCTCGACCTCTAGCCAAAGATACGTGGGCCAATACCTCCACATTAGGGTCCAAACCCAAGTCACGTGTCACTGAAGTCCAACAACTTTTTGAGTTCAGAGCCAGTGATGCCACAGGTGGTAGCAGTAGCATCAGTGGAAGTTCTGCCACCAGCCAGTCAAAGATATCTGGGAGTAGCTACCTCCCCTCACCAAAGGTTGCAGAAGAGTCTCAAGTACAGACCTCATCTCAGAATGAACAATCCATAGGCCTTAGTGTTAGGCCTCACCTGTTAAGAGCCTCCAGTATGCCTGTTAATGTCCCACGCAGAAAAGGATCAGATTCAACTGATGAGCAAAGTTCCCAGTCTCAAAATGGCTCAACTGAGAAGCTTTTTCGACCGGCTGATGGAGGTGACAGGAGAGGCAGCATTCCCCAGGACAGGGCCAGCTTGCATCAACAGATCACAGCTGCACTTAAAAGGGTGCGTGAATTAGAAGAGCAAGTCCGCACCATCCCAGAATTGAAGGCTCAAATATGTTCACTTAGAACAGAAAGGGAAGGACTGCTTCAAAAAATTCTGCAGCACCAGTCAGAACAAAAGAGACCTTTGCAGCTGAAAGAGATCGAGGTTCTTCAAGCTGACTTGCAAGTGAGTGCTTTACCCCCATCTACAAGTGGGAAGGAAGATGCACTTTTCCTTTCCAAAAACAAAGTTGCTGATCATGAAATCGTTCATGAAGTGCCCTCTGACAGATCCACAGAACAGCTCCCAGAAAAACCACATTTTGAAGTACAGCTTAATGTACAACCAGATTCTAAAATAAACAAACCTGTAACTGATACAGAGTCAGAAAAGGAACAAGTGCCAGCTCCTGTTTCTGTCCCGGTGATACTCATAGACAAAGCAGAAACTCCAACTGATCCTGATGAAGAAGAGGAACTTTTGCAGGAACCTACACTTCAAGAAGAAGCATCAAAGAGTCCCTCAGAGCAAGTAAAGGAGCAGGAGAGATCAGAGATTTTGCTTGAAGATAAACAGCCAACACTGTTAGAAGGGATTCCAGCTTCAGAATCTGAATGTACATCAACTCAAGAAGTTACCATGACTGTTCAAAGACCAAGTGTAATTATAATTGAGGAGAATACAACAGCCCAACCTGCCGAACAGCAACTTGTCTCTAACTTGGAGCTGGAGGCAAAATTGAAAACTTTGGAAGAAAGTTTAAGCAAGGCAAGCTGTGAACTGGAAAAGACAAATGTCTTGCTAAGagaagaaatggataaaaacagacaaaaggaTGAGAGAATACAGGAACTAACTGACCAAGTGAAAGAGCAGATTCTTCAAGGTCCTATTGAGACAGAGCCGCAACCTGAACCAGTTGTCAAATGTGATGCATCGGTTAGTACAGACAGCAAAAGTGTCCTTGAGAAAGGAATCTCAACAGAACCTCAACCAATTGAGGATCCCAAAGTAACTGAATCTCAATGCTCGAGCACTCAAACAAATATAGTAGAAGCTCGAGACATTGAAGTGCTTGCACAAGTCACTACAGCAGAGAAAATTGTAGGGGTAGAGGTAGTCATGTGTGACCAGTCAATAGAGACAGATGTCCTGGACAATCTAGAAGGCAACAATAGTCTGGAAGTCTTGGAAATGCTAGAAAACACAGACTCTATAAAAAACAAAGAACAAGAGTGTGATATCAAAGATAGTGAATTAAGCCAGATTACAGATACCAAAGTCAGTGAAAATGTTGCAGAAAGTGACACTGAAGAATATGTCATGGTAGAAAGTGCTATGGTTGAGACTTTGGCTAGTGAAATTGAAGTTACTGagcccacagtccaaaagacagaATCTGCGGAGAGTCTAGGCATTGAAAGCACAGtaacagagaaagaaagagaagaaggAAGTTCAGGTTTGCAAACACAGCAGGAACCAAAAGAAACACAAGGACAGGATCCCCACCCTCAATCTCAAAGGGCATCTGAAGCCACAGCGTCTCCTGCTGCTATCGGCCAAGTTGTTAATCGTATACAGGGACTTTTTAATGAGCAGTGGGCCAGTCTGGGAAGTGGAGGCCAAGATGCAAAAGGAGAGAGCTCCCAGAAACCTCATTCTTCCAAAATAAGCTCCATTCAAAGCCACCTGAGAGGGTCCCTCAGTGCCCTGTCTGCCTTTTACTCACCTGTTCAGAAAGGAGGGGCTGCAAGACAATCAGGCCTCAAATCCATCATGAAGAAGAATGACTGTCCTGACAAGCAGGGCAATGGGGGAGCGAAGAAGAACTTGAAGTTTGTTGGCGTAAATGGAGGTTATGAGAGCACGTCCAGTGAGGACTCCAGTGGTGAGGAGAATCAGGACGCGGTTGAGGAGGTGGAAAGCTCCGAGCCTGAGGTGGAGCAGGGAGAGGAGGACAGTGGGGCGGCCCAGGAGGAGGCTGCTGCTGCTGGGGAGCAGAGTGAAGGGGTGCAGGCGGAGGGGACAGAGGGCTCTGAGGAGCCTGATGTCTGCCAGGCCTCCATGAGTCCCCAGGAGGAGCAGCCTGTCAGTGAGTTAGTTGATAAGAACTTCATGGCTGCTTGTCATTTCCTGAAGGATCGCATGGCAGAGGTTTCTGCTCCAAATAAAGAAATGAGGCAGGTTCTGATGATGTTGTATCAGGAGTGGTTTCGTGTGTCAAGTCAGAAGGATTCTCAGGCTGAAACAGTCACACTGTACCTCAGAGAGGTGGGCTTTCACACCCCGACTCTGCTGCGCTACATTGTGAACCTGGCAGATGGCAACGGCAACATGGCTCTGCACTACAGCGTGTCCCATTCCAACTTCACTGTGGTCAAACTCTTACTAGACACAGGCTTGTGTGAGGTGGATCACCAGAATAAGGCAGGTTACACTGCTATAATGCTGGCAGCTCTGACTGCGACAGAAAATCCTGAGGACATGGAGGTGGCACAACAACTACTGAGAATGGGCAAAATCAATGCTCGCGCCAGCCAgTCAGGGCAGACAGCACTGATGCTTGCGGTCAGTCATGGACGGGCGACAATGGTGCAGGTTCTTCTGGACAGCGGAGCGGAAGTGAACCTTCAGGATCGAGATGGCTCCACTGCTCTCATGTGTGCCTGTGAACACGGCCATACCGAGATCGCCAAAATACTGCTGGAGAGACCAGACTGTGACCTGACACTCACAGATAAGGATGGACACACAGCTCTGTCAGTGGCCATGAAGGCCTCACACACCGAGATCATTGATCTCCTGAACGCTCGCTCTGATCCAGGACCAGTCACAGATTCAGCGGCCCCGCTCTGAGTCCAGCAGCCTCGTCTTCATCTCTACTGCCTCAACCCGACTTGCCGACCAGGCCCACGGTCAACATTAAGGAGACAGCACTTACCAGTGAAAGAAACGGCCAGTGAGAAACGCCAATAACAGATGCCATGGAGGCTGGACTTCCCTAAAACGTCCCCGATTGTCCTGAAGCACAGTTACTGGAGCTACTTCCAGCAGGCGGATGGTACATCGTTGATGATACATGTTTTGGCCTTCTATTTTCAGGTAATGTGACTATATTTTGTTAGTGGATCGAGCGTAATCTACGAATGTTGTTAAAGAAGTGATCAGATGCacactatatttatttttattgcacttTCCTGTAATTTTCTCCCCGGAGATGTACCAAGGCCTGTTTTAGTATAACCTAATGTGTCTTCCTACAGTATATGAGGGTTTTGGGGGTCATTCCTCTGCCTTTACAGGTGGAACAGGGAAGATTTTACAGTCACACAGTTGTGTTGTTGTTAGTATGTGTCCTGTTATCATATTTTTAAACCCCAACACAGAGCCAAGCACTGAGAAAAGTAATCTTCAGAGGTGATTCAGAGGCCTTGCGTTTATTATATTGGTTATTTTTAGTCAAATTTTGTTTTagcaaattttgttttatttggcacATCTGCCAGTTGCAAATGAAAATGCTTTGGTCATTGGtcaaaaatacttttttcttttattattattaataatattattgttattattattaatattattaatattactattgttAAAACTAAGAAAAAGATTAAATCAATACAGAAATATAACAATGTaaaaacagtttctgtattttgtgattcagagGCGTTTTCTGTTAATTTACTGTAATGGGAC
>TCONS_00062793
ATGATGTTGTATCAGGAGTGGTTTCGTGTGTCAAGTCAGAAGGATTCTCAGGCTGAAACAGTCACACTGTACCTCAGAGAGGTGGGCTTTCACACCCCGACTCTGCTGCGCTACATTGTGAACCTGGCAGATGGCAACGGCAACATGGCTCTGCACTACAGCGTGTCCCATTCCAACTTCACTGTGGTCAAACTCTTACTAGACACAGGCTTGTGTGAGGTGGATCACCAGAATAAGGCAGGTTACACTGCTATAATGCTGGCAGCTCTGACTGCGACAGAAAATCCTGAGGACATGGAGGTGGCACAACAACTACTGAGAATGGGCAAAATCAATGCTCGCGCCAGCCAgTCAGGGCAGACAGCACTGATGCTTGCGGTCAGTCATGGACGGGCGACAATGGTGCAGGTTCTTCTGGACAGCGGAGCGGAAGTGAACCTTCAGGATCGAGATGGCTCCACTGCTCTCATGTGTGCCTGTGAACACGGCCATACCGAGATCGCCAAAATACTGCTGGAGAGACCAGACTGTGACCTGACACTCACAGATAAGGTGATATTATTAAGCATTATACAGTACAAATGACATTGAAGTTTTGACCCAGAAgatatatatgtacacatacactaccagtcaaagtttggggtcagtatgatttttaaatgttttaaaataagcttctcctgctcaccaaggctgcatttatttaattaaaatacagtacGATTTGTAAAGTTGTGAGATGTTATTGCACTATATAATAACtcttcaaaagtagtttataatttaatttaatcaattattacagtgattttaatTATGAATTTTCTGCTCCATTACTCTAGTCtgcagag

Function

symbol description
kank4 Predicted to be involved in negative regulation of actin filament polymerization. Predicted to be active in cytoplasm and cytoskeleton. Is expressed in several structures, including cardiovascular system; head; lateral plate mesoderm; median fin; and nervous system. Orthologous to human KANK4 (KN motif and ankyrin repeat domains 4).

GO:

id name namespace
GO:0030837 negative regulation of actin filament polymerization biological_process
GO:0005856 cytoskeleton cellular_component
GO:0005737 cytoplasm cellular_component

KEGG: NA

ZFIN:

id description
ZDB-GENE-120423-1 Predicted to be involved in negative regulation of actin filament polymerization. Predicted to be active in cytoplasm and cytoskeleton. Is expressed in several structures, including cardiovascular system; head; lateral plate mesoderm; median fin; and nervous system. Orthologous to human KANK4 (KN motif and ankyrin repeat domains 4).

Ensembl:

ensembl_id ENSDARG00000059473

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00062791 False 576 processed_transcript 0.49 2 32410848 32415854
TCONS_00062792 False 5391 mRNA 0.45 11 32415132 32507298
TCONS_00062793 True 854 mRNA 0.44 3 32497493 32504815

Neighbor

gene id symbol gene type direction distance location
XLOC_032127 dock7 coding upstream 6215 32326074 ~ 32404633 (+)
XLOC_032126 NA coding upstream 87081 32320730 ~ 32323767 (+)
XLOC_032125 NA coding upstream 263116 32138926 ~ 32147732 (+)
XLOC_032124 NA coding upstream 303356 32093848 ~ 32107492 (+)
XLOC_032123 si:dkey-148h10.5 coding upstream 351738 32046202 ~ 32059110 (+)
XLOC_032129 NA coding downstream 12801 32520099 ~ 32595157 (+)
XLOC_032130 cyldl coding downstream 326709 32834007 ~ 32844728 (+)
XLOC_032131 ghrhrb coding downstream 375523 32882821 ~ 32961129 (+)
XLOC_032132 NA coding downstream 463255 32970553 ~ 33037109 (+)
XLOC_032133 NA coding downstream 530301 33037599 ~ 33039353 (+)
XLOC_032122 NA non-coding upstream 574894 31826335 ~ 31835954 (+)
XLOC_032121 NA non-coding upstream 630365 31758398 ~ 31780483 (+)
XLOC_032135 NA non-coding downstream 773055 33280353 ~ 33281036 (+)
XLOC_032137 CR855206.3 non-coding downstream 1305990 33813288 ~ 33835181 (+)

Expression


Co-expression Network