G1320086


Basic Information

Item Value
gene id G1320086
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 67077245 ~ 67165860 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1506553
ccctttgccttgatgacagccttgcacactcttggcattctctcaaccagcttcacctggaatgcttttccaacattcagttcccacatatgctgagcacttgttgactgcatttccttcactctgcggtcctacgcatcccaaaccatctcaattgggttgaggtcaggtgattgtggaggccaggtcatctgatacagcactccatcactgtccttcttggtcaaatagccattacacagcctggaggtgtgttttgggtcattgtcttgttgaatatcaaatgatagtcccactaagcgcaaaccagatgggatggcgtattgctgcagaatgctgtggtagccatgctggttaagtgtgccttgaattcaaaataaatcacagacagtgtcaccagcaaagcaccatcacacctcctcctccatgcttcacggtgggaaccactcatgcagagatcatccgttcatctactctgcgtctcacaaagacatggcggttggaaccaaaaatctcaaatttggactcatcagaccaaaggacaggtttccaccggtctaatgtccattgcttttgtctcttggcccaagcaagtctcttcttattattggtgtcctttagtagtggtttctttgcagcaattcgaccatgaaggactgattcacacagtctcctctgaacagttgatgttgagatgtgtctgttacttgaactctgtgaagaatttatttgggctgtaatttctgaggctcaaaactctaatgaacttatcctctgcagcagaggtaactctgggtcttccattcctgtggcggtcctcatgaaagccagtttcttcatagcgcttgatggttttgcgactgcactcgaagaaactttaaaagttcttcatgtcttaaagtaatgatggactatcgtttttctttgcttatttgagctgtttatgccataatatggacttgtcacaacacaactgattgtctcaaacgagttaagaaggaatgaaataccacaaattaacttttaacaaggcacacctgttcattgaaatgcattccaggtgacaacctcatgaaactggttgagattgccaagagtgtgcaaagctgtcatcaaggcaaagggtggctactttgaacaatctcaattataaaatatatttgatttgtttaacacttatttggttactgcatcattccatatgtgttatttcatagttttgaggtcttcactattattctacaatgtagaaaatagtaaaaataaagaaaaacccttgaatgagtaggtgtgtccaaacttttgactggtactgtatatataacaaaTATAGTTACCAAAGAAATTGGAATTCTAGGAAAACTAGATAGATTTCACATAGAGTTGCTCCAATTCTAACTGAACAGACAATGCAAACACTGCAGTTGTACTATCACATCATATCATGCATGAGGCTTATAGTCAGCTCGtctctgtgtactgtactgttgcAGATGCATTTTCTAAATGAAAGCTAGGATATAGGCCTAGCTAGTGTTGCTAAGCTAAGAAACTGGATGAATCTCTTTGGGGACCGTTTGTGCAAGTGATTGATTGCCTGAGTTAACTGAGGCCAAGACCTTCGGCCAAGATGGCTTTTAAAGGCCAATATGTCTTAAAATCTACTGCTTTCTCCTTCACCGCTATTGGTACCACGATCTGACAATGCAGTAGGCTACCTGtatatgtgtactgtatgtagttGATATATGCATGATAAGCACTCTCTTACCCCTTAAACAATCTACCTCCCTCATTCTGCACATTGTACATTGTTCAAGAAGGAAATACCCCCATGAAGATCTTCTTGAGCTGAATTAAAATGGTCTTTCCTCTTAATGAGAGGGTGTCAAACTATGTCATAATGACAGTATTTTCGTGTTCATTTAAAGTCATGAAATGTTGGTCAGTACTTCATGTCCTCTGCTTTGATGTATAAACTTGATATGGGCTTGATTTAGGCCTACTGTTGTAATACACTAAATAAACGA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1506553 True 2030 lncRNA 0.41 2 67077245 67165860

Neighbor

gene id symbol gene type direction distance location
LOC118938832 LOC106609653 coding downstream 1611 67071314 ~ 67075634 (-)
LOC110490598 LOC106576550 coding downstream 134495 66940740 ~ 66942750 (-)
LOC110490597 LOC106609625 coding downstream 136577 66924042 ~ 66940668 (-)
LOC110490781 LOC106576552 coding downstream 157184 66808409 ~ 66920061 (-)
LOC110501008 LOC105020375 coding downstream 364213 66655198 ~ 66713032 (-)
LOC110499840 LOC106609638 coding upstream 205522 67371382 ~ 67378695 (-)
LOC118938833 LOC106608919 coding upstream 619357 67785217 ~ 67797863 (-)
LOC118938834 LOC106593864 coding upstream 635214 67801074 ~ 67803118 (-)
LOC110501000 LOC106576558 coding upstream 644723 67810583 ~ 67922051 (-)
LOC110500996 LOC106609604 coding upstream 800374 67966234 ~ 67997921 (-)
G1320090 NA non-coding downstream 7274 67069232 ~ 67069971 (-)
G1320057 NA non-coding downstream 47559 67026419 ~ 67029686 (-)
G1320031 NA non-coding downstream 79865 66996615 ~ 66997380 (-)
G1319849 NA non-coding downstream 114190 66962738 ~ 66963055 (-)
G1319846 NA non-coding downstream 117085 66959930 ~ 66960160 (-)
G1320132 NA non-coding upstream 10720 67176580 ~ 67176811 (-)
G1320135 NA non-coding upstream 16984 67182844 ~ 67183284 (-)
G1320143 NA non-coding upstream 48107 67213967 ~ 67214212 (-)
G1320147 NA non-coding upstream 54309 67220169 ~ 67220483 (-)
G1320150 NA non-coding upstream 62606 67228466 ~ 67228685 (-)
G1319847 NA other downstream 115941 66960951 ~ 66961304 (-)
G1319781 LOC106576551 other downstream 214964 66856179 ~ 66862281 (-)
G1319357 LOC106593594 other downstream 795137 66279045 ~ 66282108 (-)
G1318935 NA other downstream 1604081 65469967 ~ 65473164 (-)
G1320139 NA other upstream 27256 67193116 ~ 67193493 (-)
LOC110513021 exoc4 other upstream 906541 67998532 ~ 68239937 (-)
G1321652 nrf1 other upstream 1865166 69031026 ~ 69073276 (-)
LOC110490790 LOC106609779 other upstream 1989666 69149477 ~ 69163694 (-)

Expression


Co-expression Network