XLOC_032136 (pik3r3b)


Basic Information

Item Value
gene id XLOC_032136
gene name pik3r3b
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 33537267 ~ 33558977 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00062801
GAAATGAAGCTACCGTTTCGTCATGGTAGGACGGAGTGGATTGTAGAGCTGGTATCTACTTTCTGTTCTGTCGGACTGTTTAAGAGATTTTTATAAAAATGCTTTATCAAGTTATACCGGATGAGTGAAGCCTGGTGCTTTGACAGCTTTCATATGACACGCAGTTACTCTGAAGCAGGCATTCAGACTGTTAAAGTTGGGCTGTCCGTTCAGTCAGACGAGCTTTTTTATGTTTCCTTCGTCCATCTGTTGAAAATTAGATTTTACTCAAGTTGGTGAGCGTTTAGTCGATCACCCGAGGACTCAGACCATGTACAATACAGTGTGGAATACGGAGAAAGAAGATGACGACTGGAGAGACGTGATGATGCCCTATTCCActgaattaatattttacattgaaATGGACCAGCCGCCAGCTCTTCCTCCCAAGCCAACAAAACCCATGACACCAGTAAACGGCAATGGTGTGAAAGAAGCCGCCAGCGGCTCACTGCAAGAAGCAGAATGGTACTGGGGAGACATATCAAGGGAAGAGGTGAATGATAAATTGCGAGACATGCCTGATGGTACTTTCCTGGTACGGGACGCTTCAACCAAGATGCAGGGAGATTACACATTAACGCTAAGGAAAGGTGGAAACAATAAGCTAATAAAAATCTACCATCGAGATGGGAAGTACGGATTCTCAGACCCGCTCACGTTTAACTCTGTGGTGGAGCTCATCAGTCACTACAGACATGAGTCACTGGCCCAGTACAACACAAAACTGGACGTTAAGCTCATGTATCCGGTCTCCCGCTACCAGCAGGATCAGCTGGTGAAAGAGGACAACATTGATGCAGTGGGAAGGAAGCTCCAGGAGTATCACAATCAATATCAGGAGAAGAGTAAAGAATATGACAGACTCTACGAGGAGCACACAAAAACCTCACAGGAGATCCAGATGAAACGTACCGCAATAGAGGCCTTCAATGAGACTATTAAAATTTTTGAAGAACAGTGTCACACACAGGAGCGCTACAGTAAGGAATACATTGAGCGATTCCGCAGAGAGGGCAACGACAAAGAGATTGAGAGGATTATGATGAACTACGAGAAGCTTAAATCCCGTCTGGGTGAAATTCACGACAGTAAGACCCGGCTTGAACAGGACCTGAAAACGCAGGCTCTGGACAACAGGGAGacggacaagaaaatgaacagCTTAAAGCCAGATCTCATTCAGCTCCGAAAGATTAGAGATCAGTACCTTGTTTGGCTAAATCATAAAGGTGTACGACAGAAACGAATCAACGATTGGCTGGGCTTAAAAAATGAGACCACAGATGATGCCTACTTTGTCAGTGAGGAGGATGAGAATCTGCCACACTATGACGAGAAGAGCTGGTTTGTGGGGGACCTGAACCGAACGCAGTCAGAAGATTTGCTACATGGCAAACCTGACGGAGCTTTCCTCATCCGGGAAAGCAGCAAGAAAGGCTGTTACGCCTGCTCTGTTGTTGTGGAAGGCGAGGTGAAGCACTGCGTCATCTATAGCACACCCCGCGGCTTCGGCTTTGCAGAGCCCTACAACTTGTATAGCACTCTTAAAGACTTGGTCCTGCACTACCACCAGACCTCACTGGTCCAGCACAATGACTCGCTCAACGTGCGGCTGGCGTACCCAGTGTATGCACAGATGCCCTCAGGACCCCGGAGATGAAGACTTGCCCCCCGAAAAAACTAAACTCTTTACACTCCCAGGAGGGGGGGACAGTTTCTgaacaaataacaaacaaacaaaaaacattcagacaaaaaaaaaaagaaataaacacttgCTGCAACACACACGTCAGCCACCTTGgagttatatatttttacaagaaCAATTTGGAGGGCATTCTTTCTAAAGACTGCTTGATTTGCACAAGGaagttttaaatgtttgtgaatgtgaaaaAAAGCAGAAGGAAGCAGAGGAGGCGAGTTTCAGGTGACCCGCGCTGCTACCTAAACTCCAGCTGGGACATTTTACATGCTCCATTTTAGCTTTTAGCTtgagcttcttcttttttttccccgatcTTCCTGCCTTTTTTTCACACATCCTTCCATTTTTCATTcagctgtttttttctttctttctattgtCTTTGCATAACTCTTTAACGAAAATGTAAGGCaggaaaaaattttaaaatttctccatctctctctttctttctctctctttctctgtgtttaACAAAGTTAAAACATATGTAGCAAACAGACGACTGACACTTTCTGAGTGTTCTCACAGTGACTGCTGCTGAACGAGAGGTTGTGGGAGGGTTGTTTGGGAGGGCACACGTGAAAATGTGTTGTAGTCttaaaaacaaagttttttttttttgtcctaatTTTCTGTTTTTCTGGATCAAAATATCTGTCCTTTCTAACCAGAAAAGATCATTACAGTTCAGTACAAAGACCAAAGTTGGCATGGGGaggactttttattattattgttattattatttggctTATATTAAATGAGCGGCAAGTTAATACATGTTTGCAAACGACACAAAATAGTTTGGGTCTGTGTCCTGTGGAGTACCAAGTTATTGTTAAGAACCAAAATCGTATGCACAGACACAGTTAACATAAAGCACTTATGTAGAACTGAAAAGTAAGCGCTGCATGTTTAAACACcaaatttaaaaacaatgatTCACGTATgtgtctgtgttgttgttttttttaactaatgtGGCATCTAAATGTCTGGTCTAGAACAATTGGATTTGTGTAGCTCACACATACGATCAAGAAAACGTCGGAGCAGCGTGTATGTTACAGCAGATGTGCTTTAGTACATAACTTGAAATAAAAAGTGCAATCCAGCTTTTGATGGTAGCGAAGTGGTCTGTCAGAGAGAAACAAACTGCTCTCAGTTGCATCAAAAAGCGATAATCACTTGAACCTTTTGAAgaattgattttgttttgttttgttttgtttaaaaaaaagcccCTTTATTGCCTAGTGCTTCTCTTTTTAGCAGGTTGACTCGTTCTGTATCAGAAAAGAGAAAATACACTTTTCATTGTGGCTGCCTGTTGCTTTTAATGTCACACAATAAAACctttatgaaaatatatttacagCATGTCGGTATGTCAGTTACATCACTGTCCTGTTTTGGTCTTATTTTTTGTACTAGTAGGTTTTCTAGTTGAGTATTTCAGTTCacatagggttttttttttttcttttgttctctTACAgttttccccttttcacaattTGGCCATACACTGAAAAGTTGTTAGAGTTAGCCAGCTCCCTTACCCACCACTGCAACTACCCAACTGTTCCCCTCAATGCACAGCCTGATAAACAGCAGCAAATAAGCTGCAAACGAAATCGCATACTACTCACTAAGATACTatgtttgaatttgaatttaataCACAACCGTTAGAAAAGGACACTCTATATTCATCTTATTTTTCGCGTACGAGCGAGCGCAGCCatatgaatctttttggcttgagactttcGCTCTTATTCAGTTCTATTCATATTCAGATGTTAAAAACGGCTCGTTACATTGAAAACTGACATTatcttatattattctactttgtctgtatagttaTGGACCCACTTGTATGTAGAGCGAGAAATTTGATCGTTTTCTGCCTTTTATAATATCGATAGTATACTTGTAGTATCTGTCGTTTATCGTTATCACGTGACACATTCACATTGGATGTCCCAGTGTCCACTGGATATGCAGTTCATAATCtggccagaagtagtaggtcatccaggtacatTTTGCCTATTGTTTATCAAATAATAGGAATTCGGACAAACTACTTGGCTCacattctgttttttgttttcagcCTAGGCTGAAAAAATggtgtctgcaaaattgttgcaaacaatttatatgtgttgaattcaAACTAACAAATGAAATTTTGTGATGTTTAACTTTAATTTGTTTGAATAAATTTAgtccaaataaatagtttacaaccccTTAACCACTAAAAAAgttagtaaatccaataaatcatctttgaataatttttttttttattgtaggctGGTtcgctagttttagctggtcgaccaacgCAATCGCacaacaattcgtaactttttgatttagtggataattcgtatgaatttgtacaatctaattaaaaaaatgtagtatgatttgctcatcacccaatgacggttgggtttagggctggagttgggtgccatgcctcctgtttaaaatcgtacattttcatacgactaaaCTCGTtcgaatttgtacaatctaatttgtacaatttagtacgatttgcttatcactcaatgacgattgggtttaggggtggggtttggtgccacgcctcctttttaaaatcgtacattttcatgcGACTAaactcatacaaattcatacaaattagccactaaactgacaaaacataaaatacttgcaTTTTCTCGTAAGAACAGGCTGGGTTGACCAGCCTAGgttttttagaggggttttggccattccagGCTAGCTTTCCGCCATTTccaggtcttagctggtcaggctgggagatgaccagctaaaaccaacttgaccagcctagccagactgagagcacagccaaaaccagctatgtccagcttaaatcaggctggtcaagctgtttttttttttttgttttttttttttgctggttttagctggtcatcttccagcctggaaatggcctaAACCCCTCTGAAaccaaaccagccaaccagcttagacAGGTTTACGCTGTTTTCTCAGCAGAAGTATGGGATTTTGGACGCATCAAAAGTAAAATTTATATTCAACTATATTGTCAAAATATTCTCCCAGAAAACTTTCAAATTGTATATGTGATTACGAATTTGTCGATGCTCACAATAGCTGTTTTTTCTCACAAGATCGGGTTGTttgtttggatcagctgtgtcATACGAGACGGGAAACTTTAGTTGGAGTCTTCTGGTGGTTAGTTTGGTGGTGGTGATGATGGGGTCCAAACAGACAGAGCATTCAGTCAAATCAGCTGTTGAGATTAAGTTACATCCTCGAGCCCTAATGAAAACCACATGCAGCCGATGGAGGTTTTTTCTTTTCTCCCATCCACTGTTTATTTCAGCTGTTCATCCTGTTGCTATTGAAAGTGACTGTGGTTTGATTGGGTGTTATTGGCAGAACTCAGTGTTCTTGTCTCGTCTGCTTTACCATGGCTGTGGTACGGCTTGATCTCGCTCACCCAGAACATGCTCGCCTCTGAAAGTTGATTTTTAGTTCTGTGTGTGCGATTTGTTCTAGAAAACATCTGCGGAGCTTTGGTTTTACCATTTTTTCAATGGAACATTGTATGTTGCTGTGTTCAGAATCACAGgtccagttttatttttattctgtcctcaattcttttttaattattatttgtttgtttgtttttgcttgaaGCTGGGTCCTGAGGGCCCCCCTGTCTATTACTTGAACTCTTGCATCACTCACCATTGAATGTCTTTAATAATGCATAGATATAACATATATTAAAACACAGGAAATCCCCTTTATGGTGCGAATGGAAACATGGGTGGACATATTTAGGAGTAGAACTCAACGTGTGTGTTTTGTCGAAATGAAAGGGGTTTATTTATGTTCACAAAGCTCAGATATGACAGATTATTGGAGTCCAATATAGCACACATCATATTTAAAgagttttagttatttaataGGCTGGTCAACAACATGTTATGTTTGACAATTTACGCCATGACATGATATTGATTAAAGAAAGTAAAGAAAAACGAAATGTTTTAATCActgttttgctatttttattagcattttcccACACATCGAGACCAAAGATTTAAGTTTGCTTTGATTACATTGTTTGGTTAGTACTAGTTTTAAAAAGATGCATACCCCACCCCCACACCCCAGTATTTCAATTGCCTTGCTTTCATGCAAACTTAATTTTGTGTCTTAGTTTTTGGGTTGCTATCGCCATCCCCTTGCTTGTCAGAAAAACATCTGTTACTGTCCGTATATATTTGAGGGCTCGCTGTGGATTGGCTGGgctgcatttgttttgtttttgccattTGAAAAATGATAGTTTGTTTACCGAACTGAGTTTTGTTAAGCCTCAAAGTAAACAGATCAGCCTAAAGCTGTTCATTTTTGCACTCACTTGTTTGTAATGGGTATATACTTTATTTGTGTGAGTGTGccatcttagattttttttgtcattaatttgTCTTTTCAGTCACTAAAGTCAGCGAAATTGAGTGTCTctaagcattttttatttacagaatAGTCTCGCAGACTCCAGATAGATTCTTTCTTGctctttttcattgttttgtaAAATTCATAAAGAAAACAGACAACCCTATACCACACagaaatgtatgttttttatttgtttttgttttttaagtgatTGTCATTCTCTGCAGGGCAGAAAGCAGTAGGGATTGCTTGCTTTCTTTGTTTCTATACTCAAGAAAGCATTTGTTTTTTATCGCGAAAGTTTTTTCAGGGACGTGAAAAGCATTGCATTGGGAATTCGTATGAGAGACATTTACTAGagtgctttttttttgtattgaagtGGGAATGGGGGAAGCTTGCAAATCATAACAAGCCGACAAAATCAACAGTGCATTGCTTCAAAAGCTCAGAGGGTTTGGACATGAaccaaaacaacttttttttttttcttggactCTTAACTGCTGGAGTTTTCAGATAGACACGGTATACAAAGCAGGTGTTATGACTAGAAGACCTGGCTAAGGTTATTTCCGGACTGTTAACTAGCACTGGCTATTTTCCCCTTGTGCAGTTCTGCAAAGTTTTATTTGCAGTCAGGTTTGAATATGTTGTGATTCTCGTTGGGAGTCTTTTGTGTTCTTACCACAGCTGTCCTACCGTGATATCCAGCCCAtttcttatataaaaataaaataaaataaaaacaaatgttttcagaaaaaggaaaagagGAAAAAAACGATCACTCTCCTTCCCACTTTGACATACGTAAAACCCAGCATGCTTTGTTACTCTTgactgttgttttgtgtatggaaaaaacttacaaaaaaaggaaaagtaaaaagaaaaaaaaataagatgtgGAACAAAACTGTTATTTGTCTGTTTATGGTGTAGTCGAATATAAATTTTACTATAGCTTATGActttttttcatgcttttttcaGCTGAAATAAGTTGGAGCCCTTTGTTGCAGTGACAAACTCAAAATGATGTTCAGAAAAACTGAGACAGAGGAGCTGAAGCAATAGACGACAGCGATTTTTCAGTACCGTTTGCACAACCTCTACCGACATGTAAAATGCATCTTATGGAAAACCTTTAAATTTCACTCTCAGATCAATGTATAGTTTAAATACACACTTTATTCTGCATAATGCAAAATATTTCCTCAACACCAGCAGTGTTTTCATCTTTTATAGACTCAGCTTGAGCAATAAGCCACGGGCCTTTGATGTCtgagaaataaaaaaagcacTCCAATGAAAATAAACATGTTGCTCTGGCTCTGGTTCATATAACCTTGTATAATGTCTTCTTCGGACAAGTTATGGCACAAAAAGGACACGAGACACTGATCTCCTGTTCGTTGCATGTAGAGAACAAGAGACGTCAGAAATCCTCTCTCTCAGTATTTGAATATCATTGTTGCTTCAGACTTCTCGGTATTCTTCAGTTACGACTTCCGACACAAAACATTTTCTTGTATCTGTTACGATAGTTTGTATTGGTTGTAGACTCTCCATTTGTTATGAGGTGAACTCATGTATATACTCAATGGAACTCCACATTATTCAGTTCTCTTgcagaataaagaaaaatattttgttcaaaatA
>TCONS_00062802
ACAGACAGCTGAGTGCAGGCTGTATACATGCAGCTCAAAAAGGATCCCGAGGAGGACGCTCTTCCTCCCAAGCCAACAAAACCCATGACACCAGTAAACGGCAATGGTGTGAAAGAAGCCGCCAGCGGCTCACTGCAAGAAGCAGAATGGTACTGGGGAGACATATCAAGGGAAGAGGTGAATGATAAATTGCGAGACATGCCTGATGGTACTTTCCTGGTACGGGACGCTTCAACCAAGATGCAGGGAGATTACACATTAACGCTAAGGAAAGGTGGAAACAATAAGCTAATAAAAATCTACCATCGAGATGGGAAGTACGGATTCTCAGACCCGCTCACGTTTAACTCTGTGGTGGAGCTCATCAGTCACTACAGACATGAGTCACTGGCCCAGTACAACACAAAACTGGACGTTAAGCTCATGTATCCGGTCTCCCGCTACCAGCAGGATCAGCTGGTGAAAGAGGACAACATTGATGCAGTGGGAAGGAAGCTCCAGGAGTATCACAATCAATATCAGGAGAAGAGTAAAGAATATGACAGACTCTACGAGGAGCACACAAAAACCTCACAGGAGATCCAGATGAAACGTACCGCAATAGAGGCCTTCAATGAGACTATTAAAATTTTTGAAGAACAGTGTCACACACAGGAGCGCTACAGTAAGGAATACATTGAGCGATTCCGCAGAGAGGGCAACGACAAAGAGATTGAGAGGATTATGATGAACTACGAGAAGCTTAAATCCCGTCTGGGTGAAATTCACGACAGTAAGACCCGGCTTGAACAGGACCTGAAAACGCAGGCTCTGGACAACAGGGAGacggacaagaaaatgaacagCTTAAAGCCAGATCTCAT

Function

symbol description
pik3r3b Predicted to enable 1-phosphatidylinositol-3-kinase regulator activity. Predicted to be involved in insulin receptor signaling pathway; phosphatidylinositol phosphate biosynthetic process; and regulation of phosphatidylinositol 3-kinase activity. Predicted to act upstream of or within phosphorylation. Predicted to be part of phosphatidylinositol 3-kinase complex. Is expressed in immature eye; nervous system; neural tube; periderm; and somite. Human ortholog(s) of this gene implicated in colon adenocarcinoma. Orthologous to human PIK3R3 (phosphoinositide-3-kinase regulatory subunit 3).

GO:

id name namespace
GO:0043551 regulation of phosphatidylinositol 3-kinase activity biological_process
GO:0046854 phosphatidylinositol phosphorylation biological_process
GO:0008286 insulin receptor signaling pathway biological_process
GO:0016310 phosphorylation biological_process
GO:0005942 phosphatidylinositol 3-kinase complex cellular_component
GO:0016740 transferase activity molecular_function
GO:0046935 1-phosphatidylinositol-3-kinase regulator activity molecular_function
GO:0016301 kinase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-040426-743 Predicted to enable 1-phosphatidylinositol-3-kinase regulator activity. Predicted to be involved in insulin receptor signaling pathway; phosphatidylinositol phosphate biosynthetic process; and regulation of phosphatidylinositol 3-kinase activity. Predicted to act upstream of or within phosphorylation. Predicted to be part of phosphatidylinositol 3-kinase complex. Is expressed in immature eye; nervous system; neural tube; periderm; and somite. Human ortholog(s) of this gene implicated in colon adenocarcinoma. Orthologous to human PIK3R3 (phosphoinositide-3-kinase regulatory subunit 3).

Ensembl:

ensembl_id ENSDARG00000034409

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00062801 False 7940 mRNA 0.39 10 33537267 33558977
TCONS_00062802 True 863 processed_transcript 0.47 7 33540846 33550502

Neighbor

gene id symbol gene type direction distance location
XLOC_032135 NA coding upstream 256231 33280353 ~ 33281036 (+)
XLOC_032134 pomgnt1 coding upstream 441501 33076839 ~ 33095766 (+)
XLOC_032133 NA coding upstream 497914 33037599 ~ 33039353 (+)
XLOC_032132 NA coding upstream 500158 32970553 ~ 33037109 (+)
XLOC_032131 ghrhrb coding upstream 576138 32882821 ~ 32961129 (+)
XLOC_032137 CR855206.3 coding downstream 254311 33813288 ~ 33835181 (+)
XLOC_032138 CR855206.2 coding downstream 258714 33817691 ~ 33819979 (+)
XLOC_032139 gpbp1l1 coding downstream 322395 33881372 ~ 33910958 (+)
XLOC_032140 orc1 coding downstream 372118 33931095 ~ 33950917 (+)
XLOC_032141 NA coding downstream 422662 33981639 ~ 33982494 (+)
XLOC_032129 NA non-coding upstream 942110 32520099 ~ 32595157 (+)
XLOC_032126 NA non-coding upstream 1213500 32320730 ~ 32323767 (+)
XLOC_032142 NA non-coding downstream 424892 33983869 ~ 33984665 (+)
XLOC_032145 NA non-coding downstream 626696 34185673 ~ 34186594 (+)

Expression


Co-expression Network