Gene
RNA
| Item | Value |
|---|---|
| gene id | G1321277 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 68001552 ~ 68001931 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1508078 | True | 380 | lncRNA | 0.42 | 1 | 68001552 | 68001931 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110500996 | LOC106609604 | coding | downstream | 3631 | 67966234 ~ 67997921 (-) |
| LOC110501000 | LOC106576558 | coding | downstream | 79501 | 67810583 ~ 67922051 (-) |
| LOC118938834 | LOC106593864 | coding | downstream | 198434 | 67801074 ~ 67803118 (-) |
| LOC118938833 | LOC106608919 | coding | downstream | 203689 | 67785217 ~ 67797863 (-) |
| LOC110499840 | LOC106609638 | coding | downstream | 622857 | 67371382 ~ 67378695 (-) |
| LOC110490613 | ube2h | coding | upstream | 1082874 | 69084805 ~ 69114891 (-) |
| LOC110490606 | LOC106609763 | coding | upstream | 1116846 | 69118777 ~ 69127452 (-) |
| LOC110490790 | LOC106609779 | coding | upstream | 1147546 | 69149477 ~ 69163694 (-) |
| smo | LOC106609776 | coding | upstream | 1162224 | 69164155 ~ 69184500 (-) |
| LOC110490615 | tspan33 | coding | upstream | 1182724 | 69184655 ~ 69201940 (-) |
| LOC110513021 | exoc4 | non-coding | downstream | 1317 | 67998532 ~ 68239937 (-) |
| G1321274 | NA | non-coding | downstream | 12637 | 67988553 ~ 67988915 (-) |
| G1321267 | NA | non-coding | downstream | 30519 | 67970319 ~ 67971033 (-) |
| G1321255 | NA | non-coding | downstream | 50214 | 67951111 ~ 67951338 (-) |
| G1321254 | NA | non-coding | downstream | 52317 | 67948654 ~ 67949235 (-) |
| G1321278 | NA | non-coding | upstream | 514 | 68002445 ~ 68002723 (-) |
| G1321279 | NA | non-coding | upstream | 3973 | 68005904 ~ 68006161 (-) |
| G1321284 | NA | non-coding | upstream | 15373 | 68017304 ~ 68017799 (-) |
| G1321293 | NA | non-coding | upstream | 41512 | 68043443 ~ 68043832 (-) |
| G1321298 | NA | non-coding | upstream | 48723 | 68050654 ~ 68064869 (-) |
| G1320139 | NA | other | downstream | 808059 | 67193116 ~ 67193493 (-) |
| LOC110511902 | LOC106609654 | other | downstream | 916947 | 67079306 ~ 67084695 (-) |
| G1319847 | NA | other | downstream | 1040248 | 66960951 ~ 66961304 (-) |
| G1319781 | LOC106576551 | other | downstream | 1139271 | 66856179 ~ 66862281 (-) |
| G1321652 | nrf1 | other | upstream | 1029095 | 69031026 ~ 69073276 (-) |
| G1321729 | NA | other | upstream | 1218372 | 69220303 ~ 69223028 (-) |
| G1321997 | NA | other | upstream | 1560379 | 69562310 ~ 69563040 (-) |
