Gene
RNA
| Item | Value |
|---|---|
| gene id | G1321298 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 68050654 ~ 68064869 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1508105 | True | 605 | lncRNA | 0.43 | 2 | 68050654 | 68064869 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110500996 | LOC106609604 | coding | downstream | 52733 | 67966234 ~ 67997921 (-) |
| LOC110501000 | LOC106576558 | coding | downstream | 128603 | 67810583 ~ 67922051 (-) |
| LOC118938834 | LOC106593864 | coding | downstream | 247536 | 67801074 ~ 67803118 (-) |
| LOC118938833 | LOC106608919 | coding | downstream | 252791 | 67785217 ~ 67797863 (-) |
| LOC110499840 | LOC106609638 | coding | downstream | 671959 | 67371382 ~ 67378695 (-) |
| LOC110490613 | ube2h | coding | upstream | 1019936 | 69084805 ~ 69114891 (-) |
| LOC110490606 | LOC106609763 | coding | upstream | 1053908 | 69118777 ~ 69127452 (-) |
| LOC110490790 | LOC106609779 | coding | upstream | 1084608 | 69149477 ~ 69163694 (-) |
| smo | LOC106609776 | coding | upstream | 1099286 | 69164155 ~ 69184500 (-) |
| LOC110490615 | tspan33 | coding | upstream | 1119786 | 69184655 ~ 69201940 (-) |
| G1321293 | NA | non-coding | downstream | 6822 | 68043443 ~ 68043832 (-) |
| G1321284 | NA | non-coding | downstream | 32855 | 68017304 ~ 68017799 (-) |
| G1321279 | NA | non-coding | downstream | 44493 | 68005904 ~ 68006161 (-) |
| G1321278 | NA | non-coding | downstream | 47931 | 68002445 ~ 68002723 (-) |
| G1321277 | NA | non-coding | downstream | 48723 | 68001552 ~ 68001931 (-) |
| G1321332 | NA | non-coding | upstream | 64387 | 68129256 ~ 68129607 (-) |
| G1321333 | NA | non-coding | upstream | 68726 | 68133595 ~ 68134589 (-) |
| G1321341 | NA | non-coding | upstream | 92015 | 68156884 ~ 68157244 (-) |
| G1321352 | NA | non-coding | upstream | 115783 | 68180652 ~ 68180984 (-) |
| G1321353 | NA | non-coding | upstream | 116411 | 68181280 ~ 68181482 (-) |
| G1320139 | NA | other | downstream | 857161 | 67193116 ~ 67193493 (-) |
| LOC110511902 | LOC106609654 | other | downstream | 966049 | 67079306 ~ 67084695 (-) |
| G1319847 | NA | other | downstream | 1089350 | 66960951 ~ 66961304 (-) |
| G1319781 | LOC106576551 | other | downstream | 1188373 | 66856179 ~ 66862281 (-) |
| LOC110513021 | exoc4 | other | upstream | 7532 | 67998532 ~ 68239937 (-) |
| G1321652 | nrf1 | other | upstream | 966157 | 69031026 ~ 69073276 (-) |
| G1321729 | NA | other | upstream | 1155434 | 69220303 ~ 69223028 (-) |
| G1321997 | NA | other | upstream | 1497441 | 69562310 ~ 69563040 (-) |
