G1321333


Basic Information

Item Value
gene id G1321333
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 68133595 ~ 68134589 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1508149
CCACAACGACAACAACAGGTAGAAGAGATGACACTGATGGAAGAGGGAGGAtaaagagacgaggagagagaccgtaagagggaagaggaagagactaggagagagacagtaacagagggaagaggaggaagtgactaggagagagacagtaacagagggaagagaaggaagagactaggagagagacagtaacagagggaagaggaagagactaggagagagacagtaacagagggaagagaaggaagagactaggagagagaccgtaacagagggaggagggagactaggagagagacagtaacagagggaagaggaggaagagacaagcagagagacagtaacagagggaggaagagaccaggagagagacagtaacagagGGAAGAGGTACAGCAGCTACTTCAGCAAGGAGAAtaagagagattaagagagatcaattgaggaaagaagagagagatttATTGAGGGAACAAGAgatgattagagagagagaaaagagagtgacgaagagagagatgaggggatagGGAGACGTCGACAGTGGGATGACACAGGTATGACGGtaggggtgaagaggaggagagggttcaGAGGAAGGTCAATGAAAGATGGGGCCAGTGGCCCCCCTACTGATGTGCCTGGAGGTGAACAGGTCTGtgtcatgttctctctgtctcattaCCAGCCCCGTTACACACATTCTGTTGGAGGCTAAAATAACTTTCTGGAAAAGTGGAAAAAAACTCTTTCAACTCTGGAATTTTAAAGTCAATTCTTGCTTGTGTTGTGTTTTCTTAAAGTAAAGAATGCTCTTTTGTCTTATTTAACTACATCTGAGTCACACAGTGTGCCATTCTCTCCAGTGACCATCTATTCAGTTGAATTTGTCCCTACAGGGATA
>TU1508151
CCACAACGACAACAACAGGTAGAAGAGATGACACTGATGGAAGAGGGAGGAtaaagagacgaggagagagaccgtaagagggaagaggaagagactaggagagagacagtaacagagggaagaggaggaagtgactaggagagagacagtaacagagggaagagaaggaagagactaggagagagacagtaacagagggaagaggaggaagagactaggagagagacagtaacagagggaagagaaggaagagactaggagagagaccgtaacagagggaggagggagactaggagagagacagtaacagagggaagaggaggaagagacaagcagagagacagtaacagagggaggaagagaccaggagagagacagtaacagagGGAAGAGGTACAGCAGCTACTTCAGCAAGGAGAAtaagagagattaagagagatcaattgaggaaagaagagagagatttATTGAGGGAACAAGAgatgattagagagagagaaaagagagtgacgaagagagagatgaggggatagGGAGACGTCGACAGTGGGATGACACAGGTATGACGGtaggggtgaagaggaggagagggttcaGAGGAAGGTCAATGAAAGATGGGGCCAGTGGCCCCCCTACTGATGTGCCTGGAGGTGAACAGGTCTGtgtcatgttctctctgtctcattaCCAGCCCCGTTACACACATTCTGTTGGAGGCTAAAATAACTTTCTGGAAAAGTGGAAAAAAACTCTTTCAACTCTGGAATTTTAAAGTCAATTCTTGCTTGTGTTGTGTTTTCTTAAAGTAAAGAATGCTCTTTTGTCTTATTTAACTACATCTGAGTCACACAGTGTGCCATTCTCTCCAGTGACCATCTATTCAGTTGAATTTGTCCCTACAGGGATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1508149 False 904 lncRNA 0.46 2 68133595 68134589
TU1508151 True 907 lncRNA 0.46 3 68133595 68134589

Neighbor

gene id symbol gene type direction distance location
LOC110500996 LOC106609604 coding downstream 135674 67966234 ~ 67997921 (-)
LOC110501000 LOC106576558 coding downstream 211544 67810583 ~ 67922051 (-)
LOC118938834 LOC106593864 coding downstream 330477 67801074 ~ 67803118 (-)
LOC118938833 LOC106608919 coding downstream 335732 67785217 ~ 67797863 (-)
LOC110499840 LOC106609638 coding downstream 754900 67371382 ~ 67378695 (-)
LOC110490613 ube2h coding upstream 950216 69084805 ~ 69114891 (-)
LOC110490606 LOC106609763 coding upstream 984188 69118777 ~ 69127452 (-)
LOC110490790 LOC106609779 coding upstream 1014888 69149477 ~ 69163694 (-)
smo LOC106609776 coding upstream 1029566 69164155 ~ 69184500 (-)
LOC110490615 tspan33 coding upstream 1050066 69184655 ~ 69201940 (-)
G1321332 NA non-coding downstream 3988 68129256 ~ 68129607 (-)
G1321298 NA non-coding downstream 68726 68050654 ~ 68064869 (-)
G1321293 NA non-coding downstream 89763 68043443 ~ 68043832 (-)
G1321284 NA non-coding downstream 115796 68017304 ~ 68017799 (-)
G1321279 NA non-coding downstream 127434 68005904 ~ 68006161 (-)
G1321341 NA non-coding upstream 22295 68156884 ~ 68157244 (-)
G1321352 NA non-coding upstream 46063 68180652 ~ 68180984 (-)
G1321353 NA non-coding upstream 46691 68181280 ~ 68181482 (-)
G1321359 NA non-coding upstream 55054 68189643 ~ 68190139 (-)
G1321363 NA non-coding upstream 57765 68192354 ~ 68192782 (-)
G1320139 NA other downstream 940102 67193116 ~ 67193493 (-)
LOC110511902 LOC106609654 other downstream 1048990 67079306 ~ 67084695 (-)
G1319847 NA other downstream 1172291 66960951 ~ 66961304 (-)
G1319781 LOC106576551 other downstream 1271314 66856179 ~ 66862281 (-)
G1321652 nrf1 other upstream 896437 69031026 ~ 69073276 (-)
G1321729 NA other upstream 1085714 69220303 ~ 69223028 (-)
G1321997 NA other upstream 1427721 69562310 ~ 69563040 (-)
G1322348 NA other upstream 1764096 69897748 ~ 69899703 (-)

Expression


Co-expression Network