XLOC_032141


Basic Information

Item Value
gene id XLOC_032141
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 33981639 ~ 33982494 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00064870
GCCTAACAAAAATGAAGcgtttaataagtaaataaagtgaATGCAACACTTCACAATGGAGTTTAAGGAGACATTTTTTAGGTTTTTGTAGAAGGAAACTAAGCTGCAGTATTGTGACTGACAGCTCTTGAGCCTGTGGCAGAACTGGAGGAAATGTTCTTGACAGATCAGCAAGCTGCAGCAGGGAAGGGGTTTGACCTCAAGCCCACTACTTGAAGAAAACGAAAGAAAGTGTCAGTACTTTCTGCTCCATATCAGTGGAGTGTTTCTGCTCATCTTCAAAGGCCTTTGTGATGAGTCCTGTCACCAAGACGATGCTTTATTTATCAAAGTAAACACATTCTCTAACGTTCTTTAAATTCTTATTGGATGGTTAAATCATGGCAAACATATGTCATATGTAAAAAGCAACATAgatgtaaaatatttatacatttagtcatttagcagatgcatttttcaaagcgacttacaattaagGAGGAATTCCTATTCAGTGTTTTTTGTATGGTCTGATAAACAATATCAACATTATGTACACTGACCTACTACTTAATGTGATAGTTTAaccaaaattaaacatttaagcaGTACAACAttgaagaagatttttagctgaaattgtgGTTCCAGGTTATTCATAAAAtgtaagtcaatagttacaggcaCTTTGTGAGTTCATACAGGTAAGCATAcaggtaaaacaaaattaataatcatGGCTACTGATGGTTCATTGAGACGTCTGTAATTTCAACAATTTACACGCATTAGAAAGCTTACACATTCTATAAAGTCATGACACACATTAAAGGAGTGGTCCCCAACCATACCCTATTTTAAACTTAAGTTAAAG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00064870 True 856 lncRNA 0.35 1 33981639 33982494

Neighbor

gene id symbol gene type direction distance location
XLOC_032140 orc1 coding upstream 30722 33931095 ~ 33950917 (+)
XLOC_032139 gpbp1l1 coding upstream 70681 33881372 ~ 33910958 (+)
XLOC_032137 CR855206.3 coding upstream 146458 33813288 ~ 33835181 (+)
XLOC_032138 CR855206.2 coding upstream 161660 33817691 ~ 33819979 (+)
XLOC_032136 pik3r3b coding upstream 422662 33537267 ~ 33558977 (+)
XLOC_032142 NA coding downstream 1375 33983869 ~ 33984665 (+)
XLOC_032143 si:ch73-185c24.2 coding downstream 46038 34028532 ~ 34036231 (+)
XLOC_032144 ap1m3 coding downstream 56469 34038963 ~ 34073164 (+)
XLOC_032145 NA coding downstream 203179 34185673 ~ 34186594 (+)
XLOC_032146 CR848703.1 coding downstream 459915 34442409 ~ 34510136 (+)
XLOC_032135 NA non-coding upstream 700603 33280353 ~ 33281036 (+)
XLOC_032133 NA non-coding upstream 942286 33037599 ~ 33039353 (+)
XLOC_032132 NA non-coding upstream 944530 32970553 ~ 33037109 (+)
XLOC_032150 NA non-coding downstream 960111 34942605 ~ 34943518 (+)
XLOC_032151 NA non-coding downstream 995206 34977700 ~ 34980647 (+)

Expression


Co-expression Network