XLOC_032142


Basic Information

Item Value
gene id XLOC_032142
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 33983869 ~ 33984665 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00064665
GAAAACTTTTAACTGAAGAAAACATCTTACCAACTGAAGAAAACAACTCATGCACAGTACATCTTGGATGGTCTGAAAATGAGTAAACTAACAGCAAATCTTAATTTTATGAGCAGAACAGATGACTTTCAGTAAGGATAATGCATCGTTTTCTCAAGTGCTACATTTAATAATACTGGCGCCTTTGTCCATAGTATGAActgcatttgatttatttacatttcaaaaaccTCCCAGTAAAAAGATGTCAATGCAAAGTCCCCACAGACCCGATGCGCTACAATGGTAGCTTATATCGTAGGTTCCATTTCCTCTTGAGTAATCCAAGGTCAACATGCCCTGAGATATCAATCCTTCCTGAATCTGAAGTGTCCTTTCACAGTCTGTTCTCTATAGCCATGTGGCCTTGGTGGAGTGTCTCTTTGAGCGATGATGGAACCTGGCCACAGGGAAGTGACAGTAACGCAGAGCCCTACTGCGATTAGCCTCCCTTGGGCTATGACCCCTTCTTGGGTCTGGGGGGGCTAGTAGTCAGGCCTCTTCAGCGGTAGcatctattccagcataagtGAAGTTCTCAAAGAGAGCCATGTTGACATAAGCCTAGAATACAAAAAAGAAGTAGTGGTTTGGAGGGAACAGGCAGGGGGAACTGAATAAATAACCTTAATTGGAGCTCAAATGGAATATGTTTGTGCTACATGAGGAATATTGAAAAACTATCAAATATACGGAAATCTATTCGATTTCAggtcttttttttccaaaacagctTTTAGGGTCCACACCAATGCCAA

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00064665 True 797 lncRNA 0.41 1 33983869 33984665

Neighbor

gene id symbol gene type direction distance location
XLOC_032141 NA coding upstream 1375 33981639 ~ 33982494 (+)
XLOC_032140 orc1 coding upstream 32952 33931095 ~ 33950917 (+)
XLOC_032139 gpbp1l1 coding upstream 72911 33881372 ~ 33910958 (+)
XLOC_032137 CR855206.3 coding upstream 148688 33813288 ~ 33835181 (+)
XLOC_032138 CR855206.2 coding upstream 163890 33817691 ~ 33819979 (+)
XLOC_032143 si:ch73-185c24.2 coding downstream 43867 34028532 ~ 34036231 (+)
XLOC_032144 ap1m3 coding downstream 54298 34038963 ~ 34073164 (+)
XLOC_032145 NA coding downstream 201008 34185673 ~ 34186594 (+)
XLOC_032146 CR848703.1 coding downstream 457744 34442409 ~ 34510136 (+)
XLOC_032147 lrp8 coding downstream 527221 34511886 ~ 34811508 (+)
XLOC_032135 NA non-coding upstream 702833 33280353 ~ 33281036 (+)
XLOC_032133 NA non-coding upstream 944516 33037599 ~ 33039353 (+)
XLOC_032150 NA non-coding downstream 957940 34942605 ~ 34943518 (+)
XLOC_032151 NA non-coding downstream 993035 34977700 ~ 34980647 (+)
XLOC_032154 CR385065.1 non-coding downstream 1399526 35384191 ~ 35393308 (+)

Expression


Co-expression Network