G1321370


Basic Information

Item Value
gene id G1321370
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 68206457 ~ 68207452 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1508194
gtttctgaggagaggtactgtatgtgtctgaggTGAGGTAGGAACAGtggaggagaggtactgtatgtgtctgaggagaggtactgtatgtgtgaggtgaggtactgtatgtgtctgaggagaggtactgtatgtgtccgaggagaggtactgtatgtgtctgaggTGAGGTAGGAACAGtggaggagaggtactgtatgtgtctgtgtctccatcaCTAATAAGCAAACAAACTATCAAGCAAGAAGAGACACGTTTCAATTGAATCCCGGGCTTTTCTATCCAAGCTCTTTAGCTTTAGACAGAGTGAG
>TU1508195
tgtatgtgtctgaggagaggtactgtatgtgtctgaggagaggtactgtatgtttctgaggagaggtactgtatgtttctgaggagaggtactgtatgtttctgaggagaggtactgtatgtgtctgaggagaggtactgtatgtgtctgaggagaggtactgtatgtgtctgaggagaggtactgtatgtgtctgaggagaggtactgtatgtgtctgaggagaggtactgtatgtgtctgaggagaggtactgtatgtgtctgaggtgaggtactgtatgtgtctgaggagaggtactgtatgtgtgaggtgaggtactgtatgtgtctgaggagaggtactgtatgtgtccgaggagaggtactgtatgtgtctgaggTGAGGTAGGAACAGtggaggagaggtactgtatgtgtctgtgtctccatcaCTAATAAGCAAACAAACTATCAAGCAAGAAGAGACACGTTTCAATTGAATCCCGGGCTTTTCTATCCAAGCTCTTTAGCTTTAGACAGAGTGAG

Function

NR:

description
PREDICTED: uncharacterized protein LOC106594949

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1508194 False 311 lncRNA 0.46 3 68206457 68207079
TU1508195 True 526 lncRNA 0.46 3 68206457 68207452

Neighbor

gene id symbol gene type direction distance location
LOC110500996 LOC106609604 coding downstream 208536 67966234 ~ 67997921 (-)
LOC110501000 LOC106576558 coding downstream 284406 67810583 ~ 67922051 (-)
LOC118938834 LOC106593864 coding downstream 403339 67801074 ~ 67803118 (-)
LOC118938833 LOC106608919 coding downstream 408594 67785217 ~ 67797863 (-)
LOC110499840 LOC106609638 coding downstream 827762 67371382 ~ 67378695 (-)
LOC110490613 ube2h coding upstream 877353 69084805 ~ 69114891 (-)
LOC110490606 LOC106609763 coding upstream 911325 69118777 ~ 69127452 (-)
LOC110490790 LOC106609779 coding upstream 942025 69149477 ~ 69163694 (-)
smo LOC106609776 coding upstream 956703 69164155 ~ 69184500 (-)
LOC110490615 tspan33 coding upstream 977203 69184655 ~ 69201940 (-)
G1321368 NA non-coding downstream 1224 68204151 ~ 68205233 (-)
G1321365 NA non-coding downstream 8908 68197318 ~ 68197549 (-)
G1321363 NA non-coding downstream 13675 68192354 ~ 68192782 (-)
G1321359 NA non-coding downstream 16318 68189643 ~ 68190139 (-)
G1321353 NA non-coding downstream 24975 68181280 ~ 68181482 (-)
G1321395 NA non-coding upstream 78355 68285807 ~ 68286919 (-)
G1321428 NA non-coding upstream 144409 68351861 ~ 68353463 (-)
G1321443 NA non-coding upstream 198753 68406205 ~ 68433144 (-)
G1321453 NA non-coding upstream 214852 68422304 ~ 68423465 (-)
G1321458 NA non-coding upstream 236263 68443715 ~ 68443971 (-)
LOC110513021 exoc4 other downstream 30075 67998532 ~ 68239937 (-)
G1320139 NA other downstream 1012964 67193116 ~ 67193493 (-)
LOC110511902 LOC106609654 other downstream 1121852 67079306 ~ 67084695 (-)
G1319847 NA other downstream 1245153 66960951 ~ 66961304 (-)
G1321652 nrf1 other upstream 823574 69031026 ~ 69073276 (-)
G1321729 NA other upstream 1012851 69220303 ~ 69223028 (-)
G1321997 NA other upstream 1354858 69562310 ~ 69563040 (-)
G1322348 NA other upstream 1691233 69897748 ~ 69899703 (-)

Expression


Co-expression Network