XLOC_032145


Basic Information

Item Value
gene id XLOC_032145
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 34185673 ~ 34186594 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00064666
TTTATGGATTAAATAATCATTATTACTTTGACCGTTTTTCCTCAAATGTTCCCACAACTTTATAAATGAACTCAATTACATGATTTTCCAGTTTCCCTTAAAAAATTTTTCTTCATCCAGACACAGCCCAAAGAAAATGATACAGCAAAGCCAGTTACATCACCATTGCAATGTTCATCACAACTCTAGGAATTCATGAGCTGTATTTTATTGAGGGCTCAGCTTTTAGGTGTCATATCATGGTTATATTGAACAAAGTTCTGCTTCTACCACCTCACAAAATTGTCACATTATAGGCAGTTTAGCAACTCATTCCCTATCACAAATTGTTCTCTTCACTTATAGAGCTTGTGTGACATCTGACACAAAATATTAGATCAGTCCCAATGCCAATGTAAGTTAGATCAGCTTTATTACCATCTGAGGTTTTCTATAAAGCATGATCAAACATGGTTGCAGTCTGAATAATAATGAATTCTCTTGGGTCTCAAGCAGTCAAAGAAGTTTAAGTAAGATGTTTTCTTCTGGGATTTATTGCCTGTAGAGATAAGCTCTCTCACTGTGTGATGGTAGTTTCTACATTTCCACATAAACTAATGTTGGTCTCATACTAATTGCAGGTCCTTGTGGTGCAGGCTGATGCATTTTGACAGTCCCTCTGGCAGAAACGAGCACTTATGAAACACAGAGCTGCCTTTTGTCATCACTTCAGGCTCCCGTACTTTCCTTTGAGAAACTGATCAGCACTTAATggcgagagagagagactgagctGGTGAGTGGGAAGATTGCATCTTTCATATGTCAGTGTATGTTTGAAACACAACACTGTATCGAGACACGCAACCACAACATTAAAGATGTGTTATTGGAATGGTAtggtataattatttattaaagctgAAATCATTCAATAAATATT

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00064666 True 922 lncRNA 0.37 1 34185673 34186594

Neighbor

gene id symbol gene type direction distance location
XLOC_032144 ap1m3 coding upstream 112509 34038963 ~ 34073164 (+)
XLOC_032143 si:ch73-185c24.2 coding upstream 149442 34028532 ~ 34036231 (+)
XLOC_032142 NA coding upstream 201008 33983869 ~ 33984665 (+)
XLOC_032141 NA coding upstream 203179 33981639 ~ 33982494 (+)
XLOC_032140 orc1 coding upstream 234756 33931095 ~ 33950917 (+)
XLOC_032146 CR848703.1 coding downstream 255815 34442409 ~ 34510136 (+)
XLOC_032147 lrp8 coding downstream 325292 34511886 ~ 34811508 (+)
XLOC_032148 il23r coding downstream 681562 34868156 ~ 34895175 (+)
XLOC_032149 il12rb2 coding downstream 722003 34908597 ~ 34925690 (+)
XLOC_032150 NA coding downstream 756011 34942605 ~ 34943518 (+)
XLOC_032137 CR855206.3 non-coding upstream 350492 33813288 ~ 33835181 (+)
XLOC_032138 CR855206.2 non-coding upstream 365694 33817691 ~ 33819979 (+)
XLOC_032135 NA non-coding upstream 904637 33280353 ~ 33281036 (+)
XLOC_032151 NA non-coding downstream 791106 34977700 ~ 34980647 (+)
XLOC_032154 CR385065.1 non-coding downstream 1197597 35384191 ~ 35393308 (+)
XLOC_032155 NA non-coding downstream 1608063 35794657 ~ 35824376 (+)

Expression


Co-expression Network