Gene
RNA
| Item | Value |
|---|---|
| gene id | G1321539 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 68652661 ~ 68654125 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: E3 ubiquitin-protein ligase RBBP6-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1508437 | True | 201 | lncRNA | 0.54 | 2 | 68652661 | 68654125 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110513021 | exoc4 | coding | downstream | 412724 | 67998532 ~ 68239937 (-) |
| LOC110500996 | LOC106609604 | coding | downstream | 654740 | 67966234 ~ 67997921 (-) |
| LOC110501000 | LOC106576558 | coding | downstream | 730610 | 67810583 ~ 67922051 (-) |
| LOC118938834 | LOC106593864 | coding | downstream | 849543 | 67801074 ~ 67803118 (-) |
| LOC118938833 | LOC106608919 | coding | downstream | 854798 | 67785217 ~ 67797863 (-) |
| LOC110490613 | ube2h | coding | upstream | 430680 | 69084805 ~ 69114891 (-) |
| LOC110490606 | LOC106609763 | coding | upstream | 464652 | 69118777 ~ 69127452 (-) |
| LOC110490790 | LOC106609779 | coding | upstream | 495352 | 69149477 ~ 69163694 (-) |
| smo | LOC106609776 | coding | upstream | 510030 | 69164155 ~ 69184500 (-) |
| LOC110490615 | tspan33 | coding | upstream | 530530 | 69184655 ~ 69201940 (-) |
| G1321538 | NA | non-coding | downstream | 8564 | 68643625 ~ 68644097 (-) |
| G1321536 | NA | non-coding | downstream | 15998 | 68636187 ~ 68636663 (-) |
| G1321533 | NA | non-coding | downstream | 25009 | 68627449 ~ 68627652 (-) |
| G1321532 | NA | non-coding | downstream | 30041 | 68622222 ~ 68622620 (-) |
| G1321521 | NA | non-coding | downstream | 58395 | 68593922 ~ 68594266 (-) |
| G1321561 | NA | non-coding | upstream | 54231 | 68708356 ~ 68723387 (-) |
| G1321567 | NA | non-coding | upstream | 110040 | 68764165 ~ 68764462 (-) |
| G1321571 | NA | non-coding | upstream | 122256 | 68776381 ~ 68776617 (-) |
| G1321575 | NA | non-coding | upstream | 130143 | 68784268 ~ 68784519 (-) |
| G1321576 | NA | non-coding | upstream | 133947 | 68788072 ~ 68788282 (-) |
| G1320139 | NA | other | downstream | 1459168 | 67193116 ~ 67193493 (-) |
| LOC110511902 | LOC106609654 | other | downstream | 1568056 | 67079306 ~ 67084695 (-) |
| G1319847 | NA | other | downstream | 1691357 | 66960951 ~ 66961304 (-) |
| G1321652 | nrf1 | other | upstream | 376901 | 69031026 ~ 69073276 (-) |
| G1321729 | NA | other | upstream | 566178 | 69220303 ~ 69223028 (-) |
| G1321997 | NA | other | upstream | 908185 | 69562310 ~ 69563040 (-) |
| G1322348 | NA | other | upstream | 1244560 | 69897748 ~ 69899703 (-) |
