G1321643


Basic Information

Item Value
gene id G1321643
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 68984716 ~ 68985821 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1508569
tatataggtagtgggtgatgtggataggtagtgggtgatgtggatagtggataggtagtggatgatgtggatagtagataggtagtgggtgatgtggatagtagataggtagtggatgatgtggatagtagataggtagtgggtgatgtggatagtagataggtagtggatgatgtggatagtagataggtagtggatgatgtggatagtagataggtagtggatgatgtggatagtagatagGTAGTgtgtgatgtggataggtagtggatgatgtggataggtagtggatgatagTAGGTTGTGTTTGTTTATGTATGAACTAGAGAGGGTCAACTCTAGTTGAATTTGACATGCCTTCATGTAGGAAATAGGTAAAGTGGTCTGTGTAAAAATACCATGTCTCCATGTGAGAGATATGTCAAAATGTCTTGTGTTTGATTGTCAAGTCTTTGTGTGAGGGATATGTCATTTCGTGTGAAAATATCACCTCACGCGCTGTGTAAAGCCACGGTATACGCTATGTAAAAATGTCATGTGTCTACA

Function

NR:

description
PREDICTED: uncharacterized protein LOC106584813

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1508569 True 546 lncRNA 0.41 3 68984716 68985821

Neighbor

gene id symbol gene type direction distance location
LOC110513021 exoc4 coding downstream 744779 67998532 ~ 68239937 (-)
LOC110500996 LOC106609604 coding downstream 986795 67966234 ~ 67997921 (-)
LOC110501000 LOC106576558 coding downstream 1062665 67810583 ~ 67922051 (-)
LOC118938834 LOC106593864 coding downstream 1181598 67801074 ~ 67803118 (-)
LOC118938833 LOC106608919 coding downstream 1186853 67785217 ~ 67797863 (-)
LOC110490613 ube2h coding upstream 98984 69084805 ~ 69114891 (-)
LOC110490606 LOC106609763 coding upstream 132956 69118777 ~ 69127452 (-)
LOC110490790 LOC106609779 coding upstream 163656 69149477 ~ 69163694 (-)
smo LOC106609776 coding upstream 178334 69164155 ~ 69184500 (-)
LOC110490615 tspan33 coding upstream 198834 69184655 ~ 69201940 (-)
G1321622 NA non-coding downstream 63622 68919390 ~ 68921094 (-)
G1321582 NA non-coding downstream 190909 68793599 ~ 68793807 (-)
G1321580 NA non-coding downstream 193817 68790697 ~ 68790899 (-)
G1321579 NA non-coding downstream 194562 68789644 ~ 68790154 (-)
G1321576 NA non-coding downstream 196434 68788072 ~ 68788282 (-)
G1321657 NA non-coding upstream 19505 69005326 ~ 69036033 (-)
G1321668 NA non-coding upstream 43887 69029708 ~ 69030509 (-)
G1321677 NA non-coding upstream 68088 69053909 ~ 69054251 (-)
G1321655 NA non-coding upstream 71231 69057052 ~ 69103335 (-)
G1321652 nrf1 non-coding upstream 72200 69031026 ~ 69073276 (-)
G1320139 NA other downstream 1791223 67193116 ~ 67193493 (-)
LOC110511902 LOC106609654 other downstream 1900111 67079306 ~ 67084695 (-)
G1319847 NA other downstream 2023412 66960951 ~ 66961304 (-)
G1321729 NA other upstream 234482 69220303 ~ 69223028 (-)
G1321997 NA other upstream 576489 69562310 ~ 69563040 (-)
G1322348 NA other upstream 912864 69897748 ~ 69899703 (-)

Expression


Co-expression Network