G1321748


Basic Information

Item Value
gene id G1321748
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 69268051 ~ 69268455 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1508689
catacttccacacaaacagtaggtatcctacgcacatacttccacacaaacagtaggtatcctgcGCACATACTTcctcacacaaacagtaggtatcctacgcacatacttccacacaaacagtaggtatcctacgcacatacttccacacaaacagtaggtatcctacgcacatacttccacacaaacagtagatgaGTTTTATCCTTCTCCATAGTTCTCACCACTGtgtatcactacccagccgacagttcCATTCCCCCGAGATTAGGGAAACCTTGAGAAGTACTCCCTATGCTATCATAAGTTCCTCAGAGGCCTAGCCAGGTCGGTCCAAACACAGTTTAACTGTTCTCAGTTTTTTTCTTCGGCACACACATACAAGTTCAAATCCTGAGCTACacc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1508689 True 405 lncRNA 0.45 1 69268051 69268455

Neighbor

gene id symbol gene type direction distance location
LOC110490620 pmpcb coding downstream 30241 69233713 ~ 69237810 (-)
LOC110490619 psmc2 coding downstream 40347 69223071 ~ 69227704 (-)
LOC110490615 tspan33 coding downstream 66111 69184655 ~ 69201940 (-)
smo LOC106609776 coding downstream 83551 69164155 ~ 69184500 (-)
LOC110490790 LOC106609779 coding downstream 104357 69149477 ~ 69163694 (-)
LOC110490621 kcnc2 coding upstream 64765 69333220 ~ 69417065 (-)
LOC110499783 LOC106609772 coding upstream 156385 69424840 ~ 69430808 (-)
LOC110500968 LOC106609767 coding upstream 234082 69502537 ~ 69513403 (-)
LOC110511775 LOC106609789 coding upstream 245448 69513903 ~ 69526128 (-)
LOC110499763 NA coding upstream 341290 69609745 ~ 69610345 (-)
G1321747 NA non-coding downstream 204 69267592 ~ 69267847 (-)
G1321740 NA non-coding downstream 15858 69251961 ~ 69252193 (-)
G1321739 NA non-coding downstream 16593 69251235 ~ 69251458 (-)
G1321730 LOC106576505 non-coding downstream 54388 69213441 ~ 69213663 (-)
G1321778 NA non-coding upstream 37013 69305468 ~ 69305834 (-)
G1321783 NA non-coding upstream 40658 69309113 ~ 69309442 (-)
G1321796 NA non-coding upstream 50368 69318823 ~ 69320855 (-)
G1321939 NA non-coding upstream 179528 69447983 ~ 69505735 (-)
G1321729 NA other downstream 45023 69220303 ~ 69223028 (-)
G1321652 nrf1 other downstream 194775 69031026 ~ 69073276 (-)
LOC110513021 exoc4 other downstream 1091669 67998532 ~ 68239937 (-)
LOC118938833 LOC106608919 other downstream 1470216 67785217 ~ 67797863 (-)
G1321997 NA other upstream 293855 69562310 ~ 69563040 (-)
G1322348 NA other upstream 630230 69897748 ~ 69899703 (-)
G1323036 NA other upstream 1267997 70536452 ~ 70537139 (-)
LOC110490645 LOC106576589 other upstream 1274901 70543356 ~ 70547418 (-)
G1323207 NA other upstream 1756796 71025251 ~ 71039522 (-)

Expression


Co-expression Network