G1322340


Basic Information

Item Value
gene id G1322340
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 69879515 ~ 69880558 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1509432
gcataattccatccaggtcaccaCCAATGAATTATACTCTTGGGCAAACACCCAATACCTGCAGGTGGTGGTAAATCGCCAACCGTGGCGTTCAAACAACCCACTCCAGGTGGCAGTTTGCCAACTGATTAAAGTAGAAAATGTACTTCAAAAAATGGAGATCGCCTCAATGGTGCGTCCCGTGCTCTTACGTCATAAGGGGATACAAACAACGATGTGATGTCTAAACCCATGCTTCATACCTCTTATCCTGGATTACAGCGTACGATGACACGCATGATTTCAGTTTAGAAAAAAATACTGTCATTATTTCCCTTGCATCTCGTACATCCAGTGGTGTAACAAACCCAGCAATGACATAGAAAAAACCTTTACTTCCAGTATAATCCAACCACCAGCATGGAACATTAATATTACACTTCGGCAGGCTGGACCAGACTTGATATCTGGAGCCTGCAGACCGAGAAGGAGGACTTGCACTGAAGATACACACTGGATTTAAAAAACAAAAGCGAACATACCGAAGAAAGTACTTGTAAATACTgaacattcactatatacagacACATGGCTATCACTGGGCAGCTTGGATGGGGGGGGGTCAACAGTATGgcgacagcccaatgtccaagcATCACACATGCAGTGTAGTTTGCAGGGTTAAAATGCCTTTAGACAGCAGTGTCGGACATCACTAAAAGCTACAGTCATACAATTGGATTATAATCGGGGAGTTCTCTTTTTCATTTGGTTGGATGAAATCAACGTTTAAAAAGGAGCAGCTTCAACTGACAAAATAAAATCACTCACGAAGAAAACTAGATTGTTTATGTACAGATGGACATATTTGACATTTCAGTCCGTCCTTGCGCTGCCGCTACGTTGAGACTACTAGCGGGAAATGTAATGAGCAATAACAGATGAGAACCCAGAAGGGGCAGGTCTCGGGGTTTATATACCTTTTTCTCATTGGGCCCGAGCTCCGTCAATCGGTAAACATTGAAGTGTTTGTCGGGAGTACGCCTGTATTTCTTCAGTAACGGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1509432 True 1044 lncRNA 0.43 1 69879515 69880558

Neighbor

gene id symbol gene type direction distance location
LOC110500965 osbpl8 coding downstream 49748 69678178 ~ 69829767 (-)
LOC110499760 LOC106609764 coding downstream 238685 69618968 ~ 69640830 (-)
LOC118938965 NA coding downstream 249721 69629658 ~ 69629794 (-)
LOC118938967 NA coding downstream 254386 69625000 ~ 69625129 (-)
LOC118936535 LOC106597692 coding downstream 265296 69611623 ~ 69614219 (-)
LOC110499751 csrp2 coding upstream 666 69881224 ~ 69891087 (-)
LOC110499754 LOC106609744 coding upstream 24863 69905421 ~ 69927631 (-)
LOC110490659 NA coding upstream 512703 70393261 ~ 70394050 (-)
LOC110490652 ctrb coding upstream 515173 70395731 ~ 70397315 (-)
LOC110490645 LOC106576589 coding upstream 662818 70543356 ~ 70547418 (-)
G1322334 NA non-coding downstream 3623 69872028 ~ 69875892 (-)
G1322292 NA non-coding downstream 74420 69804491 ~ 69805095 (-)
G1322290 NA non-coding downstream 80011 69798289 ~ 69799504 (-)
G1322286 NA non-coding downstream 89217 69789656 ~ 69790298 (-)
G1322267 NA non-coding downstream 168542 69708714 ~ 69710973 (-)
G1322338 NA non-coding upstream 83 69880641 ~ 69881089 (-)
G1322348 NA non-coding upstream 17190 69897748 ~ 69899703 (-)
G1322337 LOC106598243 non-coding upstream 65083 69945641 ~ 69990817 (-)
G1322341 LOC106576605 non-coding upstream 96148 69976706 ~ 70001692 (-)
G1322380 NA non-coding upstream 121950 70002508 ~ 70002730 (-)
G1321997 NA other downstream 316475 69562310 ~ 69563040 (-)
G1321729 NA other downstream 656487 69220303 ~ 69223028 (-)
LOC110490790 LOC106609779 other downstream 722516 69149477 ~ 69163694 (-)
G1321652 nrf1 other downstream 806239 69031026 ~ 69073276 (-)
LOC110513021 exoc4 other downstream 1703133 67998532 ~ 68239937 (-)
G1323036 NA other upstream 655894 70536452 ~ 70537139 (-)
G1323207 NA other upstream 1144693 71025251 ~ 71039522 (-)
G1323296 LOC106609674 other upstream 1321942 71202500 ~ 71237846 (-)

Expression


Co-expression Network