Item | Value |
---|---|
gene id | XLOC_032158 |
gene name | BX936433.1 |
gene type | non-coding |
species | zebrafish (Danio rerio) |
category of species | model fish |
Item | Value |
---|---|
chromosome id | NC_007117.7 |
NCBI id | CM002890.2 |
chromosome length | 60270059 |
location | 36281005 ~ 36285111 (+) |
genome version | GRCz11_2017_zebrafish_Genome |
id | name | namespace |
---|---|---|
GO:0019219 | regulation of nucleobase-containing compound metabolic process | biological_process |
GO:0019222 | regulation of metabolic process | biological_process |
GO:0016070 | RNA metabolic process | biological_process |
GO:0080090 | regulation of primary metabolic process | biological_process |
GO:0051171 | regulation of nitrogen compound metabolic process | biological_process |
GO:0090304 | nucleic acid metabolic process | biological_process |
GO:0031323 | regulation of cellular metabolic process | biological_process |
GO:0006139 | nucleobase-containing compound metabolic process | biological_process |
GO:0051252 | regulation of RNA metabolic process | biological_process |
GO:1901360 | organic cyclic compound metabolic process | biological_process |
GO:0010467 | gene expression | biological_process |
GO:0010468 | regulation of gene expression | biological_process |
GO:0038202 | TORC1 signaling | biological_process |
GO:0060255 | regulation of macromolecule metabolic process | biological_process |
GO:0043170 | macromolecule metabolic process | biological_process |
GO:0050793 | regulation of developmental process | biological_process |
GO:0043484 | regulation of RNA splicing | biological_process |
GO:0005634 | nucleus | cellular_component |
GO:0043565 | sequence-specific DNA binding | molecular_function |
GO:0003676 | nucleic acid binding | molecular_function |
GO:0003677 | DNA binding | molecular_function |
GO:0003690 | double-stranded DNA binding | molecular_function |
GO:0000976 | transcription regulatory region sequence-specific DNA binding | molecular_function |
GO:0000977 | RNA polymerase II transcription regulatory region sequence-specific DNA binding | molecular_function |
GO:0000978 | RNA polymerase II cis-regulatory region sequence-specific DNA binding | molecular_function |
GO:0000987 | cis-regulatory region sequence-specific DNA binding | molecular_function |
GO:0001067 | regulatory region nucleic acid binding | molecular_function |
GO:1990837 | sequence-specific double-stranded DNA binding | molecular_function |
ensembl_id | ENSDARG00000101275 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TCONS_00062835 | False | 693 | lncRNA | 0.44 | 5 | 36281005 | 36284259 |
TCONS_00062836 | False | 997 | lncRNA | 0.43 | 8 | 36281273 | 36284870 |
TCONS_00062837 | False | 1153 | lncRNA | 0.42 | 9 | 36281273 | 36285111 |
TCONS_00062838 | False | 677 | lncRNA | 0.44 | 6 | 36281673 | 36284699 |
TCONS_00062839 | False | 683 | lncRNA | 0.43 | 6 | 36281702 | 36284606 |
TCONS_00064885 | False | 2852 | lncRNA | 0.33 | 1 | 36281720 | 36284571 |
TCONS_00062840 | False | 892 | lncRNA | 0.35 | 2 | 36281726 | 36283344 |
TCONS_00062841 | False | 712 | lncRNA | 0.44 | 6 | 36281727 | 36284706 |
TCONS_00062842 | False | 734 | lncRNA | 0.40 | 5 | 36282286 | 36284560 |
TCONS_00062843 | False | 790 | lncRNA | 0.43 | 7 | 36282472 | 36284930 |
TCONS_00062844 | True | 897 | lncRNA | 0.41 | 6 | 36282487 | 36285102 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
XLOC_032156 | NA | coding | upstream | 21851 | 35916253 ~ 36259154 (+) |
XLOC_032157 | NA | coding | upstream | 161115 | 36116704 ~ 36119890 (+) |
XLOC_032155 | NA | coding | upstream | 456629 | 35794657 ~ 35824376 (+) |
XLOC_032154 | CR385065.1 | coding | upstream | 887697 | 35384191 ~ 35393308 (+) |
XLOC_032153 | rgs4 | coding | upstream | 914061 | 35362225 ~ 35366944 (+) |
XLOC_032159 | rhcgl1 | coding | downstream | 96598 | 36381709 ~ 36391687 (+) |
XLOC_032160 | NA | coding | downstream | 129612 | 36414723 ~ 36415086 (+) |
XLOC_032161 | lrrc15 | coding | downstream | 174786 | 36459897 ~ 36463695 (+) |
XLOC_032162 | BX950188.1 | coding | downstream | 180236 | 36465347 ~ 36618498 (+) |
XLOC_032163 | BX950188.2 | coding | downstream | 226701 | 36511812 ~ 36511930 (+) |
XLOC_032151 | NA | non-coding | upstream | 1300358 | 34977700 ~ 34980647 (+) |
XLOC_032164 | NA | non-coding | downstream | 429248 | 36714359 ~ 36714622 (+) |
XLOC_032171 | BX950870.1 | non-coding | downstream | 705459 | 36990570 ~ 36990684 (+) |