Gene
RNA
| Item | Value |
|---|---|
| gene id | G1322868 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 70111764 ~ 70112050 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Transposable element Tcb2 transposase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1510113 | True | 287 | lncRNA | 0.49 | 1 | 70111764 | 70112050 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110499754 | LOC106609744 | coding | downstream | 184133 | 69905421 ~ 69927631 (-) |
| LOC110499751 | csrp2 | coding | downstream | 220677 | 69881224 ~ 69891087 (-) |
| LOC110500965 | osbpl8 | coding | downstream | 281997 | 69678178 ~ 69829767 (-) |
| LOC118938965 | NA | coding | downstream | 481970 | 69629658 ~ 69629794 (-) |
| LOC118938967 | NA | coding | downstream | 486635 | 69625000 ~ 69625129 (-) |
| LOC110490659 | NA | coding | upstream | 281211 | 70393261 ~ 70394050 (-) |
| LOC110490652 | ctrb | coding | upstream | 283681 | 70395731 ~ 70397315 (-) |
| LOC110490645 | LOC106576589 | coding | upstream | 431326 | 70543356 ~ 70547418 (-) |
| si:dkey-14k9.3 | LOC106609712 | coding | upstream | 438538 | 70550588 ~ 70558751 (-) |
| LOC110515225 | LOC106609712 | coding | upstream | 446946 | 70558996 ~ 70566048 (-) |
| G1322861 | NA | non-coding | downstream | 31236 | 70079801 ~ 70080528 (-) |
| G1322854 | NA | non-coding | downstream | 43155 | 70068354 ~ 70068609 (-) |
| G1322846 | NA | non-coding | downstream | 64526 | 70047024 ~ 70047238 (-) |
| G1322403 | NA | non-coding | downstream | 84168 | 70027224 ~ 70027596 (-) |
| G1322381 | NA | non-coding | downstream | 107818 | 70003714 ~ 70003946 (-) |
| G1322879 | NA | non-coding | upstream | 22467 | 70134517 ~ 70135026 (-) |
| G1322884 | NA | non-coding | upstream | 37286 | 70149336 ~ 70149556 (-) |
| G1322885 | NA | non-coding | upstream | 39959 | 70152009 ~ 70152600 (-) |
| G1322886 | NA | non-coding | upstream | 40678 | 70152728 ~ 70152990 (-) |
| G1322893 | NA | non-coding | upstream | 68524 | 70180574 ~ 70180796 (-) |
| G1322348 | NA | other | downstream | 212061 | 69897748 ~ 69899703 (-) |
| G1321997 | NA | other | downstream | 548724 | 69562310 ~ 69563040 (-) |
| G1321729 | NA | other | downstream | 888736 | 69220303 ~ 69223028 (-) |
| LOC110490790 | LOC106609779 | other | downstream | 954765 | 69149477 ~ 69163694 (-) |
| G1321652 | nrf1 | other | downstream | 1038488 | 69031026 ~ 69073276 (-) |
| G1323036 | NA | other | upstream | 424402 | 70536452 ~ 70537139 (-) |
| G1323207 | NA | other | upstream | 913201 | 71025251 ~ 71039522 (-) |
| G1323296 | LOC106609674 | other | upstream | 1090450 | 71202500 ~ 71237846 (-) |
| LOC118938840 | LOC106576579 | other | upstream | 1745233 | 71841725 ~ 71923263 (-) |
