XLOC_032160


Basic Information

Item Value
gene id XLOC_032160
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 36414723 ~ 36415086 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00064886
ATCTCTCATCTATTTTTGTTTCATTATACCTAAATATGGTTTGTACGGAAGAACTTCAGTGCTCCAGTCAACATCACAGGTATGATGGAACTCacttatgttttgtttattattaactggttgttaaaaaatgcaatcctttttgttttatttgtttcccCCTCAAAAAGGCATCATGTAAATTATTCATTGTTCAAATGagcattcagaaaaacaaaataaagATATGAACTGATGCCATCTGCTGTAGTGAAAAG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00064886 True 257 lncRNA 0.32 2 36414723 36415086

Neighbor

gene id symbol gene type direction distance location
XLOC_032159 rhcgl1 coding upstream 23036 36381709 ~ 36391687 (+)
XLOC_032158 BX936433.1 coding upstream 129612 36281005 ~ 36285111 (+)
XLOC_032156 NA coding upstream 155569 35916253 ~ 36259154 (+)
XLOC_032157 NA coding upstream 294833 36116704 ~ 36119890 (+)
XLOC_032155 NA coding upstream 590347 35794657 ~ 35824376 (+)
XLOC_032161 lrrc15 coding downstream 44811 36459897 ~ 36463695 (+)
XLOC_032162 BX950188.1 coding downstream 50261 36465347 ~ 36618498 (+)
XLOC_032163 BX950188.2 coding downstream 96726 36511812 ~ 36511930 (+)
XLOC_032164 NA coding downstream 299273 36714359 ~ 36714622 (+)
XLOC_032165 si:ch73-29l19.1 coding downstream 380139 36795225 ~ 36819369 (+)
XLOC_032154 CR385065.1 non-coding upstream 1021415 35384191 ~ 35393308 (+)
XLOC_032171 BX950870.1 non-coding downstream 575484 36990570 ~ 36990684 (+)
XLOC_032172 NA non-coding downstream 769107 37184193 ~ 37250364 (+)

Expression


Co-expression Network