G1322999


Basic Information

Item Value
gene id G1322999
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 70485623 ~ 70486138 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1510261
gtgtggagagATCATAGCTGACAGCATCATAGTCTTTACCTTGGCCAGAAAGGAAAGAACCTGGAAGTAAGAAAACGTGGGTTCAAGCTGCTGCAATGGGAAACCATGGCAACTCAACACTTTGCACTGCCCTGAAAACAGGGTGCCAAACTTTTGTGTAAGCCAAGCATTCTCATTGGTTATCATCTATGGCCTTTTGATTGACATCTATATGTTTTGTCCATCTTTATATTGTTGGGCTGGACGATTGGTGTTGTAATGACTTTGGGAAAATGTGTCATGATACTTTTATCATAGTGTTCTTCGTAGGAGATTTGAATAAAATTGCTCTTTGTCAGTCGTGTTTTTCAGGGTCGTGCTCATTAGGGCGCATCGCAGCAAAACGCTTTGCAACGGAAAACGAAAACAAACGTTTCTCATAGGACAGGCTGAAATAGTACCACCCCGTTTCACAACGTTTTCTGCCTACTGAACACGCCCCAGGTGTTGAGTGATAACAGATGAGATTAAACAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1510261 True 516 lncRNA 0.42 1 70485623 70486138

Neighbor

gene id symbol gene type direction distance location
LOC110490652 ctrb coding downstream 88308 70395731 ~ 70397315 (-)
LOC110490659 NA coding downstream 91573 70393261 ~ 70394050 (-)
LOC110499754 LOC106609744 coding downstream 557992 69905421 ~ 69927631 (-)
LOC110499751 csrp2 coding downstream 594536 69881224 ~ 69891087 (-)
LOC110500965 osbpl8 coding downstream 655856 69678178 ~ 69829767 (-)
LOC110490645 LOC106576589 coding upstream 57238 70543356 ~ 70547418 (-)
si:dkey-14k9.3 LOC106609712 coding upstream 64450 70550588 ~ 70558751 (-)
LOC110515225 LOC106609712 coding upstream 72858 70558996 ~ 70566048 (-)
LOC110490632 LOC106576583 coding upstream 79550 70565688 ~ 70571698 (-)
LOC110490800 LOC106609708 coding upstream 87965 70574103 ~ 70588541 (-)
G1322996 NA non-coding downstream 2525 70481699 ~ 70483098 (-)
G1322992 LOC106609740 non-coding downstream 6385 70478818 ~ 70479238 (-)
G1322973 NA non-coding downstream 41681 70443741 ~ 70443942 (-)
G1322971 NA non-coding downstream 45224 70440079 ~ 70440399 (-)
G1322968 NA non-coding downstream 50270 70435099 ~ 70435353 (-)
G1323000 NA non-coding upstream 147 70486285 ~ 70486793 (-)
G1323005 NA non-coding upstream 5373 70491511 ~ 70491741 (-)
G1323010 NA non-coding upstream 13013 70499151 ~ 70501932 (-)
G1323032 NA non-coding upstream 45449 70531587 ~ 70531883 (-)
G1323042 NA non-coding upstream 96036 70582174 ~ 70583076 (-)
G1322348 NA other downstream 585920 69897748 ~ 69899703 (-)
G1321997 NA other downstream 922583 69562310 ~ 69563040 (-)
G1321729 NA other downstream 1262595 69220303 ~ 69223028 (-)
LOC110490790 LOC106609779 other downstream 1328624 69149477 ~ 69163694 (-)
G1321652 nrf1 other downstream 1412347 69031026 ~ 69073276 (-)
G1323036 NA other upstream 50314 70536452 ~ 70537139 (-)
G1323207 NA other upstream 539113 71025251 ~ 71039522 (-)
G1323296 LOC106609674 other upstream 716362 71202500 ~ 71237846 (-)
LOC118938840 LOC106576579 other upstream 1371145 71841725 ~ 71923263 (-)

Expression


Co-expression Network