G1323063 (LOC106576594)


Basic Information

Item Value
gene id G1323063
gene name LOC106576594
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 70652058 ~ 70691752 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1510334
aatttaacaaTTCATGCCATTCAGCTGAAATAcagtatacagatgtaggatcttaatttgagcctgtttgccacagcaggaaaataatgcAGCAGCAATAGGAAATGTAAATTatcatgtggattataattaatggacatggttgaaggggttgatacatttttcgtaagggaaaaccAAGTCTGAAATgtaaaagtggaaatgacaaacttttaaaacctcaaatataTTACACATTTTAAATGTTCCTGCATTACACGAAAGATCTCCTGCAAAAgggtggtcaaattaagatcctacacctgtatatTCATTCTCAATTTAGAACATTTTAGATCAATTGTTTTGCATCACGGTCTTAGATTCTTCTGATTATACAATGATGTGACTTAAACAATCATTTGGTGACATTAATTCAGTTTTGTCCCTGGGATCTAAGTTAACTCACTGTACACTTGTCATCTGTATGTTTTGTTTTCCAGTCCTCAAAGTCACGAGACATTTGATCATTGCCCAGTAACTTGTATATTTTCTCCATCAGCTCAATCACCTGCTGGTAGTCTGTCTTTGTGTTTTTGAACACATGTCTGCTCCCACAGCAACTTACTATTTCTTTCAGGTGAGTGTCAGCCTGATTGATGAACGTGTCAAGGCTCATATGTTTGAGGTCCTCTCCATTAGTAAAGAGGACACATGTTCTCTCTTTAAATCGTTCCATGTCAGAGAAGATACCTTTCAATTGTTTCAAGATCCCTCGTTCACCATCTGTGAATCGGCCAATCTGAATCACCAGTAAGTACACACTCAACCCTGTCTGACACCACGTTAAGCAATCCGCAATGTGTTTGCTTGGTTGTTTAAGACAATCATCAAAGAAATCTGGGGTATCAATGACCCTAACCTCTGTCCCTCCCATCTTCATATTTTCTACATGACACTCTTTTGTAACTGGTACAGAGCTTGCACTTGATGGGAAAATGTTTTTCTTCAGGATTGTGTTTCCACTTCTGCTCTTTCCAGTTCCTGTCTGTCCCAGTAGCACAATGTTCAAAATGTTGCTGGGATCGCTTTCATAGTTTCTTTTACCTGGTGAAACAATAATAGCAGCAATCGAGTTAGACATGGTTTCATCCAGCTTCAATATACCTTGCTTCTCAATTAGTTTACTGATGCTCTTAAAATGATTTAGGTTATATATTTAAAAAGTGAGAACAAGATATTACTTATAATTTATAGATTTTTTGTTAGCCCGAATGTGA

Function

NR:

description
PREDICTED: GTPase IMAP family member 8-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1510334 True 1259 lncRNA 0.37 2 70652058 70691752

Neighbor

gene id symbol gene type direction distance location
LOC118938838 LOC106576602 coding downstream 3022 70644164 ~ 70649036 (-)
LOC110490633 LOC106576584 coding downstream 45909 70593116 ~ 70606149 (-)
LOC110490634 LOC106609716 coding downstream 59381 70583258 ~ 70592677 (-)
LOC110490800 LOC106609708 coding downstream 63517 70574103 ~ 70588541 (-)
LOC110490632 LOC106576583 coding downstream 80360 70565688 ~ 70571698 (-)
LOC118936248 cmas coding upstream 41610 70733362 ~ 70755356 (-)
LOC110490643 LOC106596479 coding upstream 71225 70762977 ~ 70776821 (-)
LOC118938960 NA coding upstream 85537 70776831 ~ 70848012 (-)
LOC110490694 LOC106576596 coding upstream 89943 70781695 ~ 70787736 (-)
LOC110516361 LOC106576597 coding upstream 99282 70791034 ~ 70860332 (-)
G1323042 NA non-coding downstream 68982 70582174 ~ 70583076 (-)
G1323032 NA non-coding downstream 120175 70531587 ~ 70531883 (-)
G1323010 NA non-coding downstream 150126 70499151 ~ 70501932 (-)
G1323005 NA non-coding downstream 160317 70491511 ~ 70491741 (-)
G1323000 NA non-coding downstream 165265 70486285 ~ 70486793 (-)
G1323082 NA non-coding upstream 6193 70697945 ~ 70698250 (-)
G1323083 NA non-coding upstream 10295 70702047 ~ 70702459 (-)
G1323085 NA non-coding upstream 13358 70705110 ~ 70705420 (-)
G1323088 NA non-coding upstream 21216 70712968 ~ 70713236 (-)
G1323089 NA non-coding upstream 21973 70713725 ~ 70714465 (-)
LOC110490645 LOC106576589 other downstream 106838 70543356 ~ 70547418 (-)
G1323036 NA other downstream 114919 70536452 ~ 70537139 (-)
G1322348 NA other downstream 752355 69897748 ~ 69899703 (-)
G1321997 NA other downstream 1089018 69562310 ~ 69563040 (-)
G1321729 NA other downstream 1429030 69220303 ~ 69223028 (-)
G1323207 NA other upstream 333499 71025251 ~ 71039522 (-)
G1323296 LOC106609674 other upstream 510748 71202500 ~ 71237846 (-)
LOC118938840 LOC106576579 other upstream 1165531 71841725 ~ 71923263 (-)
LOC110500989 LOC106576674 other upstream 1356212 72022817 ~ 72150996 (-)
LOC110490626 LOC106576575 other upstream 1472881 72162661 ~ 72192809 (-)

Expression


Co-expression Network