G1322676


Basic Information

Item Value
gene id G1322676
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 70734169 ~ 70763374 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1509831
AAGAATGGATCTCTGTGACTTTAGAACACATTCTAGAGTTTAGAATGTATTTCTGTGACTTTAGAACACATTCTAGAGTTTAGAATGTATTTCTGTGACTTTAGAACACATTCTAGAGTTTAGAATGTATTTCTGTGACTTTAGAACACATTCTAGAGTTTAGAATGTATTTATGTGACTTTAGAACACATTCTAGAGTTTAGAATGTATTTCTGTGACTTTAGAACACATTCTAGAGTTTAGAATGTATTTCTGTGACTTTAGAACACATTCTAGAGTTTAGAATGTATTTCTGTGACTTTAGAACACATTCTAGAGTTTAGAATGTATTTCTGTGGATGCGGTCCTGTTCCATCTGAGACTTGGCCTTCTTCTTGAGCAGCAGGATGTGTTCAGAAAACTCCCTCACAGCCCCCAGGCCTGCAGCACTGTGGCAGGAGTATTTAGCAGCGTTGATCGCCACCACTGGGGCGTCCCGGGGTACTGCACTCAGCCCAGCCAGGTTCAGACAGTCAACATCTGGTGCATCAT
>TU1509829
CCTGTATACTACTTCATTTAAAATAAAGACATTCATTTTTGTCAACACAACCTTTAGCGATATAAAACCCAAACTACCTTGATCTGACAACCTGTAAAAACTAGCAATGGGCAAAGTTATTCAAACAGACATTAGTATTCGTATACACAGGCCTATTTCAACAATGACAAGGCTTCATCTTAATGGAATAAAATGATCTATGGGACATTTCTACACTCATGACATTTGGAATTCTTCATTTAATAATGTGAATATAGTTTTAAAAATACATACGGTATTAGCCTACACAGGTTTCACTTAGCTTGCTGTTGTTGACACTACAGTCAGAGGCTCCATGTGTAGAAGTGGGAGATCTCAAAGCAATGAAAGAAAAGTTGAATTAAAATGACAGAATTAAGTCAATTAAATGAGGAGTAGCCTACAATGAGCAACCTTCAGTATAGGCTGTTTAATCTGAACAGGGTTGTTGTAGATCAGGACAGTAAAGACATGCACTGCCATATTGGATGATAGATAACCTATGGCATTTACAAGTGTCTAACTAGCGCGAGTCAGGGGctactttttctctccctcctttgtcGCACACCCCTGGTCCCTGTCCACACAGTATCTCCCGAGTCCTGCAGGCTGCACAGCAAACAAGTGTCCATGATTAAAACTATCTGGATATCCGATAAAATGTCATGATATTATTTCTAATGCCTATCCCTACTTTAGAACACATTTTAGAGTTTAGAATGTATTTCTGTGACTTTGTGACTTTAGAACACATTCGAGTTTAGAATGTATTTATGTGACTTTAGAACACATTCTAGAGTTTAGAATGTATTTCTGTGACTTTAGAACACATTCTAGAGTTTAGAATGTATTTCTGTGACTTTAGAACACATTCTAGAGTTTAGAATGTATTTCTGTGACTTTAGAACACATTCTAGAGTTTAGAATGTATTTCTGTGGATGCGGTCCTGTTCCATCTGAGACTTGGCCTTCTTCTTGAGCAGCAGGATGTGTTCAGAAAACTCCCTCACAGCCCCCAGGCCTGCAGCACTGTGGCAGGAGTATTTAGCAGCGTTGATCGCCACCACTGGGGCGTCCCGGGGTACTGCACTCAGCCCAGCCAGGTTCAGACAGTCAACATCTGGTGCATCAT

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1509831 False 531 lncRNA 0.40 2 70734169 70763374
TU1509829 True 1153 lncRNA 0.39 2 70762182 70763374

Neighbor

gene id symbol gene type direction distance location
LOC118938837 LOC106576594 coding upstream 80286 70649032 ~ 70653883 (+)
LOC110490670 NA coding upstream 164445 70565742 ~ 70569724 (+)
LOC110490651 apex1 coding upstream 183640 70547485 ~ 70550529 (+)
LOC110490654 LOC106576592 coding upstream 191335 70538862 ~ 70542834 (+)
LOC110490656 LOC106576586 coding upstream 195207 70528555 ~ 70538962 (+)
LOC110490812 LOC106576598 coding downstream 113770 70877144 ~ 71062055 (+)
LOC110490701 LOC106609709 coding downstream 393667 71157041 ~ 71158063 (+)
LOC110490712 nel coding downstream 532051 71295425 ~ 71400412 (+)
LOC110499746 LOC106609793 coding downstream 695433 71458807 ~ 71475849 (+)
LOC110499745 LOC106576507 coding downstream 715095 71478469 ~ 71488470 (+)
G1322672 NA non-coding upstream 9128 70724801 ~ 70725041 (+)
G1322671 NA non-coding upstream 10969 70722734 ~ 70723200 (+)
G1322670 NA non-coding upstream 17816 70716125 ~ 70716353 (+)
G1322668 NA non-coding upstream 23078 70708624 ~ 70711091 (+)
G1322663 NA non-coding upstream 37669 70696261 ~ 70696500 (+)
G1322694 NA non-coding downstream 20156 70783530 ~ 70783898 (+)
G1322713 NA non-coding downstream 59115 70822489 ~ 70823491 (+)
G1322717 NA non-coding downstream 65000 70828374 ~ 70828663 (+)
G1322722 NA non-coding downstream 74240 70837614 ~ 70838099 (+)
G1322728 NA non-coding downstream 86437 70849811 ~ 70850022 (+)
G1322161 NA other upstream 830511 69900944 ~ 69903658 (+)
G1322119 NA other upstream 934307 69798196 ~ 69799862 (+)
G1321053 NA other upstream 1938188 68794598 ~ 68795981 (+)
G1320834 NA other upstream 2446901 68285896 ~ 68287268 (+)
G1320366 NA other upstream 3189688 67544041 ~ 67544481 (+)
G1322725 NA other downstream 80571 70843945 ~ 70847944 (+)
G1322763 NA other downstream 172851 70936225 ~ 70937145 (+)
G1323962 NA other downstream 1427049 72190423 ~ 72191163 (+)
LOC110531894 LOC106598741 other downstream 1692843 72416050 ~ 72481441 (+)
LOC110490361 LOC106609821 other downstream 1978839 72742193 ~ 72850175 (+)

Expression


Co-expression Network