G1322729


Basic Information

Item Value
gene id G1322729
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 70850654 ~ 70851036 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1509923
TTCGTTTTAGGATACAACAACGGCAGAGAGGAATAGCACTTCTTCTGTAATCTCAGCAACGCAGAACAAAATCTCATGTGAACACTGGCTTCTGACCAGCTACTAACGTTTCCTTTTCCACAGTACACTACCTCTTTGGTAACAGGAAGTAGTTTTAGGGGGTTTCTTACTTGTTGGAGACGATTCCCTCAGCGATCTCACAGACGTGGACAAACAGCAGAGTGAATGTGAGGATCCAGCGCAGGTTGTGTCCAGGGAAGTGGAGCCAGGTGTTATGGTGGATCTGAACCTTAGAGCTCTGACTGCCCCAGCCTAGGGGGAGGGAAGTGGAGCCAGGTGTTATGGTGGATCTGAACCTAAGAGATATGACTGCCCCAGCCTAG

Function

NR:

description
ATP-binding cassette sub-family C member 9-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1509923 True 383 lncRNA 0.49 1 70850654 70851036

Neighbor

gene id symbol gene type direction distance location
LOC118938837 LOC106576594 coding upstream 196771 70649032 ~ 70653883 (+)
LOC110490670 NA coding upstream 280930 70565742 ~ 70569724 (+)
LOC110490651 apex1 coding upstream 300125 70547485 ~ 70550529 (+)
LOC110490654 LOC106576592 coding upstream 307820 70538862 ~ 70542834 (+)
LOC110490656 LOC106576586 coding upstream 311692 70528555 ~ 70538962 (+)
LOC110490812 LOC106576598 coding downstream 26108 70877144 ~ 71062055 (+)
LOC110490701 LOC106609709 coding downstream 306005 71157041 ~ 71158063 (+)
LOC110490712 nel coding downstream 444389 71295425 ~ 71400412 (+)
LOC110499746 LOC106609793 coding downstream 607771 71458807 ~ 71475849 (+)
LOC110499745 LOC106576507 coding downstream 627433 71478469 ~ 71488470 (+)
G1322728 NA non-coding upstream 632 70849811 ~ 70850022 (+)
G1322722 NA non-coding upstream 12555 70837614 ~ 70838099 (+)
G1322717 NA non-coding upstream 21991 70828374 ~ 70828663 (+)
G1322713 NA non-coding upstream 27163 70822489 ~ 70823491 (+)
G1322694 NA non-coding upstream 66756 70783530 ~ 70783898 (+)
G1322730 NA non-coding downstream 932 70851968 ~ 70852198 (+)
G1322731 NA non-coding downstream 1510 70852546 ~ 70852850 (+)
G1322738 NA non-coding downstream 9616 70860652 ~ 70860862 (+)
G1322739 NA non-coding downstream 10423 70861459 ~ 70864771 (+)
G1322754 NA non-coding downstream 71473 70922509 ~ 70923279 (+)
G1322725 NA other upstream 2710 70843945 ~ 70847944 (+)
G1322161 NA other upstream 946996 69900944 ~ 69903658 (+)
G1322119 NA other upstream 1050792 69798196 ~ 69799862 (+)
G1321053 NA other upstream 2054673 68794598 ~ 68795981 (+)
G1320834 NA other upstream 2563386 68285896 ~ 68287268 (+)
G1322763 NA other downstream 85189 70936225 ~ 70937145 (+)
G1323962 NA other downstream 1339387 72190423 ~ 72191163 (+)
LOC110531894 LOC106598741 other downstream 1605181 72416050 ~ 72481441 (+)
LOC110490361 LOC106609821 other downstream 1891177 72742193 ~ 72850175 (+)
G1324156 LOC106576365 other downstream 2002530 72853566 ~ 72856022 (+)

Expression


Co-expression Network