G1323138


Basic Information

Item Value
gene id G1323138
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 70876798 ~ 70877602 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1510428
CTCAGGAATTTGTAGTTGAACACGAACTCGCTGTCCTAATCGGTTCGTCTCCTCTCTTTTTGCAACCAAAACCCAAACGAAGTCCTATTGTCTACGTTGTCACCGTCCGTAAAAAGTTCAGATCTTCCCCGGGAGAGAAAACATTGTGAGATGCCGAAGGGAGCGAGCAACGACGCTCTAAATCCCGGGAAATATGACACGGTATGGAAGTTTGACACTTTCCCCACGACAATATATTTTTTCTTCACGCCCAAAAAAACGTAAATACAGAATGAATTCAAATGTGTTTCATATTCAAAGACGAACACACTGTTGGATTAAGTCCGCCCTGATGAATTGGCAAGAAACTGCACGTTGAACTGTAACGCCCGCGGTAAAGCGGCCAAGAAAAAGAGGGATGGAGtatcttctccacctcctccccctctctctctctctctctcaagaAAATACACAGAGCCTGTACGGATCAGTTTACACACAAAACGGGGAGAGACTGCAAACTGTCGTTGAAGCCAGAGAAAAACAACTGAGCACTCCACCCTCTTCTTTTCAGTGGCAGCGCCCAATAAAAAGAGGGATGGagtatcttctctctctcctcccccacaaTGCATTAGACCGAGCCTGTACGGATCAGTTTACTCACACGACCGGGAGAGACTGCAAACTGCCGTGAAAGTCTGAGAAAAACAATTTGACCCTCTCCACCCTCTTCTTTTCACCGGAGACGAGAAGTAACCTCTGGAAGGCCCGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1510428 True 757 lncRNA 0.47 2 70876798 70877602

Neighbor

gene id symbol gene type direction distance location
LOC110516361 LOC106576597 coding downstream 16466 70791034 ~ 70860332 (-)
LOC110490694 LOC106576596 coding downstream 89062 70781695 ~ 70787736 (-)
LOC118938960 NA coding downstream 99369 70776831 ~ 70848012 (-)
LOC110490643 LOC106596479 coding downstream 100630 70762977 ~ 70776821 (-)
LOC118936248 cmas coding downstream 121442 70733362 ~ 70755356 (-)
LOC118938899 NA coding upstream 15627 70893229 ~ 70894811 (-)
LOC118936537 LOC106594938 coding upstream 296368 71173970 ~ 71198905 (-)
LOC110490709 LOC106609674 coding upstream 321918 71199520 ~ 71237895 (-)
LOC118938839 NA coding upstream 323646 71201248 ~ 71201989 (-)
LOC110490706 LOC106576521 coding upstream 323659 71201261 ~ 71214069 (-)
G1323137 NA non-coding downstream 1221 70875375 ~ 70875577 (-)
G1323130 NA non-coding downstream 23013 70853554 ~ 70853785 (-)
G1323151 NA non-coding upstream 19799 70897401 ~ 70898052 (-)
G1323167 NA non-coding upstream 45133 70922735 ~ 70923376 (-)
G1323205 NA non-coding upstream 117788 70995390 ~ 70995795 (-)
G1323206 NA non-coding upstream 135701 71013303 ~ 71013503 (-)
G1323233 NA non-coding upstream 182658 71060260 ~ 71062184 (-)
LOC110490645 LOC106576589 other downstream 331578 70543356 ~ 70547418 (-)
G1323036 NA other downstream 339659 70536452 ~ 70537139 (-)
G1322348 NA other downstream 977095 69897748 ~ 69899703 (-)
G1321997 NA other downstream 1313758 69562310 ~ 69563040 (-)
G1321729 NA other downstream 1653770 69220303 ~ 69223028 (-)
G1323207 NA other upstream 147649 71025251 ~ 71039522 (-)
G1323296 LOC106609674 other upstream 324898 71202500 ~ 71237846 (-)
LOC118938840 LOC106576579 other upstream 979681 71841725 ~ 71923263 (-)
LOC110500989 LOC106576674 other upstream 1170362 72022817 ~ 72150996 (-)
LOC110490626 LOC106576575 other upstream 1287031 72162661 ~ 72192809 (-)

Expression


Co-expression Network