G1323151


Basic Information

Item Value
gene id G1323151
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 70897401 ~ 70898052 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1510441
aatcggtatcggctttttttggtcctccaataatcggtattgccATTGAAAAATCatttaaatcggtcgacctctagtttcgaAGTCAGAACCCATCAACGCACAGACAATTCTCTTAACTACAGTACATTACCTTCATTTGACAAACATTATTTGAAAGAACAATCATGTGACGTGGACATGAGTGGACGACCACAACTGAAAAGGACATTGTCTATTTTAAAGTCACACAGTCATACTGTGTACTCAGgggaaaaacatattttatacacaGACCGTGACCAGCCATACAGAAATGAGTTTACAGACAGAAAAGCCCTGGACCACACAGAGTGGTTAACCACCATATTTCTAATTGACACACCCCTCACTCACGGGGGTTTGAGTGGGTTCTGAGAAGACGagatatcagtcagtcagtcagtcccacaCACCGCTGTGCAGCAATCAGGGACAATCATCACTTGACGAAGAGGACAGAGCCAACAAGACTCAGTCAGAAGAAAAACTCTTCAAATACAACCCAGAGAATGACAGCCCTCAGCATGGGGTCATGacagaaacagtgtgtgtgtgtgtgtgtgtgttattcctGCTCAGAGGGGATGACAGAGACAGGTTGGATGATTGTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1510441 True 632 lncRNA 0.44 2 70897401 70898052

Neighbor

gene id symbol gene type direction distance location
LOC118938899 NA coding downstream 2590 70893229 ~ 70894811 (-)
LOC110516361 LOC106576597 coding downstream 37069 70791034 ~ 70860332 (-)
LOC110490694 LOC106576596 coding downstream 109665 70781695 ~ 70787736 (-)
LOC118938960 NA coding downstream 119972 70776831 ~ 70848012 (-)
LOC110490643 LOC106596479 coding downstream 121233 70762977 ~ 70776821 (-)
LOC118936537 LOC106594938 coding upstream 275918 71173970 ~ 71198905 (-)
LOC110490709 LOC106609674 coding upstream 301468 71199520 ~ 71237895 (-)
LOC118938839 NA coding upstream 303196 71201248 ~ 71201989 (-)
LOC110490706 LOC106576521 coding upstream 303209 71201261 ~ 71214069 (-)
LOC110490707 LOC106576520 coding upstream 330816 71228868 ~ 71232129 (-)
G1323138 NA non-coding downstream 19799 70876798 ~ 70877602 (-)
G1323137 NA non-coding downstream 21824 70875375 ~ 70875577 (-)
G1323130 NA non-coding downstream 43616 70853554 ~ 70853785 (-)
G1323167 NA non-coding upstream 24683 70922735 ~ 70923376 (-)
G1323205 NA non-coding upstream 97338 70995390 ~ 70995795 (-)
G1323206 NA non-coding upstream 115251 71013303 ~ 71013503 (-)
G1323233 NA non-coding upstream 162208 71060260 ~ 71062184 (-)
G1323235 NA non-coding upstream 167773 71065825 ~ 71066300 (-)
LOC110490645 LOC106576589 other downstream 352181 70543356 ~ 70547418 (-)
G1323036 NA other downstream 360262 70536452 ~ 70537139 (-)
G1322348 NA other downstream 997698 69897748 ~ 69899703 (-)
G1321997 NA other downstream 1334361 69562310 ~ 69563040 (-)
G1321729 NA other downstream 1674373 69220303 ~ 69223028 (-)
G1323207 NA other upstream 127199 71025251 ~ 71039522 (-)
G1323296 LOC106609674 other upstream 304448 71202500 ~ 71237846 (-)
LOC118938840 LOC106576579 other upstream 959231 71841725 ~ 71923263 (-)
LOC110500989 LOC106576674 other upstream 1149912 72022817 ~ 72150996 (-)
LOC110490626 LOC106576575 other upstream 1266581 72162661 ~ 72192809 (-)

Expression


Co-expression Network