G1322805


Basic Information

Item Value
gene id G1322805
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 71069525 ~ 71070170 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1510026
tgtagctgggtctctcgtagggctggtgtgggtgtagatgtagctgggtctctcgtagggctggtgtgggtgtagatgtagttgggtctctcgtagggctggtgtgggtgtagatgtagctgggtctctcgtagggctggtgtgggtgtagatgtagttgggtctctcgtagggctggtgtgggtgtagatgtagctgggtctctcgtagggctggtgtgggtgtagatgtagctgggtctctcgtagggctggtgtgggtgtagatgtagctgggtctctcgtagggctggtgtagatgtagttgggtctctcgtagggctggtgtgggtgtagatgtagctgggtctctcgtagggctggtgtgggtgtagatgtagctgggtctctcgtagggctggtgtagatgtagttgggtctctcgtagggctggtgagggtgtagatgtagttgggtctctcgtagggatggtgtgggtgtagatgtagttgggtctctcgtagggctggtgtgggtgtagatgtagttgggtctctcgtagggctggtgtgggtgtagatgtagctgggtctctcgtagggctggtgtagatgtagttgggtctctcgtagggctgatgagggtgtagatgtagctgggtctctcgt

Function

NR:

description
PREDICTED: uncharacterized protein LOC106583831

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1510026 True 646 lncRNA 0.56 1 71069525 71070170

Neighbor

gene id symbol gene type direction distance location
LOC110490812 LOC106576598 coding upstream 7470 70877144 ~ 71062055 (+)
LOC118938837 LOC106576594 coding upstream 415642 70649032 ~ 70653883 (+)
LOC110490670 NA coding upstream 499801 70565742 ~ 70569724 (+)
LOC110490651 apex1 coding upstream 518996 70547485 ~ 70550529 (+)
LOC110490654 LOC106576592 coding upstream 526691 70538862 ~ 70542834 (+)
LOC110490701 LOC106609709 coding downstream 86871 71157041 ~ 71158063 (+)
LOC110490712 nel coding downstream 225255 71295425 ~ 71400412 (+)
LOC110499746 LOC106609793 coding downstream 388637 71458807 ~ 71475849 (+)
LOC110499745 LOC106576507 coding downstream 408299 71478469 ~ 71488470 (+)
LOC110499701 LOC106576510 coding downstream 560122 71630292 ~ 71685611 (+)
G1322804 NA non-coding upstream 846 71068455 ~ 71068679 (+)
G1322797 NA non-coding upstream 22519 71046350 ~ 71047006 (+)
G1322792 NA non-coding upstream 29066 71039847 ~ 71040459 (+)
G1322790 NA non-coding upstream 33829 71035157 ~ 71035696 (+)
G1322807 NA non-coding downstream 32183 71102353 ~ 71102588 (+)
G1322814 NA non-coding downstream 46877 71117047 ~ 71118474 (+)
G1322816 LOC106594938 non-coding downstream 105295 71175465 ~ 71179032 (+)
G1322833 NA non-coding downstream 124263 71194433 ~ 71194666 (+)
G1322836 LOC106609682 non-coding downstream 127861 71198031 ~ 71198872 (+)
G1322763 NA other upstream 132380 70936225 ~ 70937145 (+)
G1322725 NA other upstream 221581 70843945 ~ 70847944 (+)
G1322161 NA other upstream 1165867 69900944 ~ 69903658 (+)
G1322119 NA other upstream 1269663 69798196 ~ 69799862 (+)
G1321053 NA other upstream 2273544 68794598 ~ 68795981 (+)
G1323962 NA other downstream 1120253 72190423 ~ 72191163 (+)
LOC110531894 LOC106598741 other downstream 1386047 72416050 ~ 72481441 (+)
LOC110490361 LOC106609821 other downstream 1672043 72742193 ~ 72850175 (+)
G1324156 LOC106576365 other downstream 1783396 72853566 ~ 72856022 (+)
G1324195 NA other downstream 1790650 72860820 ~ 72865809 (+)

Expression


Co-expression Network