Gene
RNA
| Item | Value |
|---|---|
| gene id | G1322837 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 71199118 ~ 71199401 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1510078 | True | 284 | lncRNA | 0.43 | 1 | 71199118 | 71199401 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110490701 | LOC106609709 | coding | upstream | 41055 | 71157041 ~ 71158063 (+) |
| LOC110490812 | LOC106576598 | coding | upstream | 137063 | 70877144 ~ 71062055 (+) |
| LOC118938837 | LOC106576594 | coding | upstream | 545235 | 70649032 ~ 70653883 (+) |
| LOC110490670 | NA | coding | upstream | 629394 | 70565742 ~ 70569724 (+) |
| LOC110490651 | apex1 | coding | upstream | 648589 | 70547485 ~ 70550529 (+) |
| LOC110490712 | nel | coding | downstream | 96024 | 71295425 ~ 71400412 (+) |
| LOC110499746 | LOC106609793 | coding | downstream | 259406 | 71458807 ~ 71475849 (+) |
| LOC110499745 | LOC106576507 | coding | downstream | 279068 | 71478469 ~ 71488470 (+) |
| LOC110499701 | LOC106576510 | coding | downstream | 430891 | 71630292 ~ 71685611 (+) |
| LOC110490715 | zcrb1 | coding | downstream | 535058 | 71734459 ~ 71737191 (+) |
| G1322836 | LOC106609682 | non-coding | upstream | 246 | 71198031 ~ 71198872 (+) |
| G1322833 | NA | non-coding | upstream | 4452 | 71194433 ~ 71194666 (+) |
| G1322816 | LOC106594938 | non-coding | upstream | 20086 | 71175465 ~ 71179032 (+) |
| G1322814 | NA | non-coding | upstream | 80644 | 71117047 ~ 71118474 (+) |
| G1322807 | NA | non-coding | upstream | 96530 | 71102353 ~ 71102588 (+) |
| G1323265 | NA | non-coding | downstream | 1678 | 71201079 ~ 71236285 (+) |
| G1323267 | NA | non-coding | downstream | 16830 | 71216231 ~ 71221307 (+) |
| G1323276 | NA | non-coding | downstream | 39544 | 71238945 ~ 71239168 (+) |
| G1323287 | NA | non-coding | downstream | 67926 | 71267327 ~ 71267583 (+) |
| G1323289 | NA | non-coding | downstream | 72845 | 71272246 ~ 71272587 (+) |
| G1322763 | NA | other | upstream | 261973 | 70936225 ~ 70937145 (+) |
| G1322725 | NA | other | upstream | 351174 | 70843945 ~ 70847944 (+) |
| G1322161 | NA | other | upstream | 1295460 | 69900944 ~ 69903658 (+) |
| G1322119 | NA | other | upstream | 1399256 | 69798196 ~ 69799862 (+) |
| G1321053 | NA | other | upstream | 2403137 | 68794598 ~ 68795981 (+) |
| G1323962 | NA | other | downstream | 991022 | 72190423 ~ 72191163 (+) |
| LOC110531894 | LOC106598741 | other | downstream | 1256816 | 72416050 ~ 72481441 (+) |
| LOC110490361 | LOC106609821 | other | downstream | 1542812 | 72742193 ~ 72850175 (+) |
| G1324156 | LOC106576365 | other | downstream | 1654165 | 72853566 ~ 72856022 (+) |
| G1324195 | NA | other | downstream | 1661419 | 72860820 ~ 72865809 (+) |
