Gene
RNA
| Item | Value |
|---|---|
| gene id | G1323422 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 71388155 ~ 71390459 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: protein kinase C-binding protein NELL2-like, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1510753 | False | 278 | lncRNA | 0.54 | 2 | 71388155 | 71390459 |
| TU1510756 | True | 431 | lncRNA | 0.52 | 2 | 71389881 | 71390459 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118938900 | NA | coding | downstream | 116983 | 71270357 ~ 71271172 (-) |
| LOC118938931 | LOC106592567 | coding | downstream | 124573 | 71247916 ~ 71263582 (-) |
| LOC110490707 | LOC106576520 | coding | downstream | 156026 | 71228868 ~ 71232129 (-) |
| LOC110490706 | LOC106576521 | coding | downstream | 174874 | 71201261 ~ 71214069 (-) |
| LOC118938839 | NA | coding | downstream | 186166 | 71201248 ~ 71201989 (-) |
| LOC110490714 | LOC106593546 | coding | upstream | 297421 | 71687880 ~ 71734443 (-) |
| LOC118938840 | LOC106576579 | coding | upstream | 451266 | 71841725 ~ 71923263 (-) |
| LOC110490787 | LOC106593403 | coding | upstream | 594269 | 71984728 ~ 72017048 (-) |
| LOC110500989 | LOC106576674 | coding | upstream | 632358 | 72022817 ~ 72150996 (-) |
| LOC110490626 | LOC106576575 | coding | upstream | 772202 | 72162661 ~ 72192809 (-) |
| G1323425 | NA | non-coding | downstream | 7852 | 71379888 ~ 71380303 (-) |
| G1323404 | NA | non-coding | downstream | 49396 | 71338180 ~ 71338759 (-) |
| G1323402 | NA | non-coding | downstream | 52053 | 71335480 ~ 71336102 (-) |
| G1323381 | NA | non-coding | downstream | 89901 | 71297753 ~ 71298254 (-) |
| G1323319 | NA | non-coding | downstream | 118472 | 71269451 ~ 71269683 (-) |
| G1323433 | NA | non-coding | upstream | 11617 | 71402076 ~ 71402486 (-) |
| G1323435 | NA | non-coding | upstream | 12271 | 71402730 ~ 71403078 (-) |
| G1323443 | NA | non-coding | upstream | 25460 | 71415919 ~ 71416316 (-) |
| G1323444 | NA | non-coding | upstream | 28117 | 71418576 ~ 71418980 (-) |
| G1323464 | NA | non-coding | upstream | 53144 | 71443603 ~ 71444963 (-) |
| G1323296 | LOC106609674 | other | downstream | 150309 | 71202500 ~ 71237846 (-) |
| G1323207 | NA | other | downstream | 348633 | 71025251 ~ 71039522 (-) |
| LOC110490645 | LOC106576589 | other | downstream | 842935 | 70543356 ~ 70547418 (-) |
| G1323036 | NA | other | downstream | 851016 | 70536452 ~ 70537139 (-) |
| G1322348 | NA | other | downstream | 1488452 | 69897748 ~ 69899703 (-) |
| G1324464 | typh | other | upstream | 850089 | 72240548 ~ 72260352 (-) |
| G1324512 | NA | other | upstream | 944901 | 72335360 ~ 72336984 (-) |
