G1323488


Basic Information

Item Value
gene id G1323488
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 71503812 ~ 71504368 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1510835
gagagagagagagagagagagagagagagagagagagagagagagaatgtgtgtatgtgtgggagaGTGAGGGCGTGAGGTCTGAAAACCACTAATCCATCCATCACACATCACTTTGTCTGAAGTTTTGAAATATGAAAGTCTAGTTTAGTGAAGTGACCATGCATGTACTTTTGATGAGTGGCTAGATAAGAGTTTAGTGCAATGAAGGACACACAGATAGAAACACTGAAgccacacagggagagagagagagagagagagagagagagagagagagagagagagagagacagacagagagagatagagacagacagagagaaagggagagagagagagatagcggagagagagagacatagacagagagagagagagacagagagagagagacagacagagagagagagagagagagagagagagagagttccggagttccaaattgagcagctgctgaaaaaatgagctcctgtatatattgagatttaaatggttttttagagtgaagtacatcgaaaaaatcaaaagaaaactgcaagactcaatagaag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1510835 True 557 lncRNA 0.43 1 71503812 71504368

Neighbor

gene id symbol gene type direction distance location
LOC110499745 LOC106576507 coding upstream 15342 71478469 ~ 71488470 (+)
LOC110499746 LOC106609793 coding upstream 27963 71458807 ~ 71475849 (+)
LOC110490712 nel coding upstream 103400 71295425 ~ 71400412 (+)
LOC110490701 LOC106609709 coding upstream 345749 71157041 ~ 71158063 (+)
LOC110490812 LOC106576598 coding upstream 441757 70877144 ~ 71062055 (+)
LOC110499701 LOC106576510 coding downstream 125924 71630292 ~ 71685611 (+)
LOC110490715 zcrb1 coding downstream 230091 71734459 ~ 71737191 (+)
LOC110490815 LOC106576513 coding downstream 233803 71738171 ~ 71763443 (+)
LOC110490816 LOC106609794 coding downstream 260403 71764771 ~ 71778703 (+)
LOC118938841 NA coding downstream 470242 71973676 ~ 71976465 (+)
G1323486 NA non-coding upstream 2071 71501477 ~ 71501741 (+)
G1323485 NA non-coding upstream 3870 71499740 ~ 71499942 (+)
G1323481 NA non-coding upstream 13473 71490096 ~ 71490339 (+)
G1323471 NA non-coding upstream 49282 71454228 ~ 71454530 (+)
G1323436 NA non-coding upstream 99517 71404025 ~ 71404295 (+)
G1323500 NA non-coding downstream 61378 71565746 ~ 71565979 (+)
G1323501 NA non-coding downstream 64111 71568479 ~ 71568679 (+)
G1323542 NA non-coding downstream 73349 71577717 ~ 71578178 (+)
G1323548 NA non-coding downstream 83738 71588106 ~ 71588562 (+)
G1323555 NA non-coding downstream 92446 71596814 ~ 71597040 (+)
G1322763 NA other upstream 566667 70936225 ~ 70937145 (+)
G1322725 NA other upstream 655868 70843945 ~ 70847944 (+)
G1322161 NA other upstream 1600154 69900944 ~ 69903658 (+)
G1322119 NA other upstream 1703950 69798196 ~ 69799862 (+)
G1321053 NA other upstream 2707831 68794598 ~ 68795981 (+)
G1323962 NA other downstream 686055 72190423 ~ 72191163 (+)
LOC110531894 LOC106598741 other downstream 951849 72416050 ~ 72481441 (+)
LOC110490361 LOC106609821 other downstream 1237845 72742193 ~ 72850175 (+)
G1324156 LOC106576365 other downstream 1349198 72853566 ~ 72856022 (+)
G1324195 NA other downstream 1356452 72860820 ~ 72865809 (+)

Expression


Co-expression Network