Gene
RNA
| Item | Value |
|---|---|
| gene id | G1323599 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 71647972 ~ 71648833 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1510963 | False | 325 | lncRNA | 0.47 | 2 | 71647972 | 71648833 |
| TU1510964 | True | 337 | lncRNA | 0.49 | 2 | 71648272 | 71648833 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110499745 | LOC106576507 | coding | upstream | 159502 | 71478469 ~ 71488470 (+) |
| LOC110499746 | LOC106609793 | coding | upstream | 172123 | 71458807 ~ 71475849 (+) |
| LOC110490712 | nel | coding | upstream | 247560 | 71295425 ~ 71400412 (+) |
| LOC110490701 | LOC106609709 | coding | upstream | 489909 | 71157041 ~ 71158063 (+) |
| LOC110490812 | LOC106576598 | coding | upstream | 585917 | 70877144 ~ 71062055 (+) |
| LOC110490715 | zcrb1 | coding | downstream | 85626 | 71734459 ~ 71737191 (+) |
| LOC110490815 | LOC106576513 | coding | downstream | 89338 | 71738171 ~ 71763443 (+) |
| LOC110490816 | LOC106609794 | coding | downstream | 115938 | 71764771 ~ 71778703 (+) |
| LOC118938841 | NA | coding | downstream | 325777 | 71973676 ~ 71976465 (+) |
| LOC118938842 | NA | coding | downstream | 369884 | 72018717 ~ 72019300 (+) |
| G1323570 | NA | non-coding | upstream | 30237 | 71617132 ~ 71617735 (+) |
| G1323555 | NA | non-coding | upstream | 50932 | 71596814 ~ 71597040 (+) |
| G1323548 | NA | non-coding | upstream | 59410 | 71588106 ~ 71588562 (+) |
| G1323542 | NA | non-coding | upstream | 69794 | 71577717 ~ 71578178 (+) |
| G1323501 | NA | non-coding | upstream | 79293 | 71568479 ~ 71568679 (+) |
| LOC110499701 | LOC106576510 | non-coding | downstream | 8213 | 71630292 ~ 71685611 (+) |
| G1323623 | NA | non-coding | downstream | 69519 | 71718352 ~ 71725041 (+) |
| G1323587 | NA | non-coding | downstream | 84362 | 71733195 ~ 71733964 (+) |
| G1323588 | NA | non-coding | downstream | 127280 | 71776113 ~ 71776792 (+) |
| G1323719 | NA | non-coding | downstream | 147219 | 71796052 ~ 71796374 (+) |
| G1322763 | NA | other | upstream | 710827 | 70936225 ~ 70937145 (+) |
| G1322725 | NA | other | upstream | 800028 | 70843945 ~ 70847944 (+) |
| G1322161 | NA | other | upstream | 1744314 | 69900944 ~ 69903658 (+) |
| G1322119 | NA | other | upstream | 1848110 | 69798196 ~ 69799862 (+) |
| G1321053 | NA | other | upstream | 2851991 | 68794598 ~ 68795981 (+) |
| G1323962 | NA | other | downstream | 541590 | 72190423 ~ 72191163 (+) |
| LOC110531894 | LOC106598741 | other | downstream | 807384 | 72416050 ~ 72481441 (+) |
| LOC110490361 | LOC106609821 | other | downstream | 1093380 | 72742193 ~ 72850175 (+) |
| G1324156 | LOC106576365 | other | downstream | 1204733 | 72853566 ~ 72856022 (+) |
| G1324195 | NA | other | downstream | 1211987 | 72860820 ~ 72865809 (+) |
