G1323720


Basic Information

Item Value
gene id G1323720
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 71796840 ~ 71797182 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1511131
AGTTAGTGTTTGAGGTATCCTCAGTACCTCAGTTAGTGTTTGAGGTCTCCTCAGTACTTCAGTTAAAGTGTTTGAGGTCTCCTCAGTACTTCAGTTAGTGTTTGAGGTCTCCTCAGTACTTCAGTTAGTGTTTGAGGTCTCCTCAGTACCTCAGTTAGTGTTTGAGGTCTCCTCAGTACTTCAGTTAAAGTGTTTGAGGTCTCCTCAGTACTTCAGTTAGTGTTTGAGGTCTCCTCAGTACTTCAGGGCGATCTGTGCTCTTTGATCTGGGAGGCCTTTGAATATCCCGTCACCCTGACACATTATATAAGATAGcagcacatacatacacacacacacacac

Function

NR:

description
Repetitive proline-rich cell wall protein 2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1511131 True 343 lncRNA 0.44 1 71796840 71797182

Neighbor

gene id symbol gene type direction distance location
LOC110490816 LOC106609794 coding upstream 18137 71764771 ~ 71778703 (+)
LOC110490815 LOC106576513 coding upstream 33397 71738171 ~ 71763443 (+)
LOC110490715 zcrb1 coding upstream 59649 71734459 ~ 71737191 (+)
LOC110499701 LOC106576510 coding upstream 111229 71630292 ~ 71685611 (+)
LOC110499745 LOC106576507 coding upstream 308370 71478469 ~ 71488470 (+)
LOC118938841 NA coding downstream 177428 71973676 ~ 71976465 (+)
LOC118938842 NA coding downstream 221535 72018717 ~ 72019300 (+)
LOC118938843 NA coding downstream 256578 72053760 ~ 72054124 (+)
LOC110490794 LOC106598106 coding downstream 403785 72200967 ~ 72203946 (+)
si:ch73-139j3.4 NA coding downstream 432437 72229619 ~ 72236599 (+)
G1323719 NA non-coding upstream 466 71796052 ~ 71796374 (+)
G1323588 NA non-coding upstream 20048 71776113 ~ 71776792 (+)
G1323587 NA non-coding upstream 62876 71733195 ~ 71733964 (+)
G1323623 NA non-coding upstream 71799 71718352 ~ 71725041 (+)
G1323722 NA non-coding downstream 2496 71799678 ~ 71799943 (+)
G1323724 NA non-coding downstream 3169 71800351 ~ 71800583 (+)
G1323827 NA non-coding downstream 127701 71924883 ~ 71925920 (+)
G1323862 LOC100380742 non-coding downstream 193810 71990992 ~ 71994632 (+)
G1322763 NA other upstream 859695 70936225 ~ 70937145 (+)
G1322725 NA other upstream 948896 70843945 ~ 70847944 (+)
G1322161 NA other upstream 1893182 69900944 ~ 69903658 (+)
G1322119 NA other upstream 1996978 69798196 ~ 69799862 (+)
G1321053 NA other upstream 3000859 68794598 ~ 68795981 (+)
G1323962 NA other downstream 393241 72190423 ~ 72191163 (+)
LOC110531894 LOC106598741 other downstream 659035 72416050 ~ 72481441 (+)
LOC110490361 LOC106609821 other downstream 945031 72742193 ~ 72850175 (+)
G1324156 LOC106576365 other downstream 1056384 72853566 ~ 72856022 (+)
G1324195 NA other downstream 1063638 72860820 ~ 72865809 (+)

Expression


Co-expression Network