G1323827


Basic Information

Item Value
gene id G1323827
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 71924883 ~ 71925920 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1511251
GGATTAAatccacaatgagtaacgataacttggctatatacacagggcacCAGTACTGAGATGATGTGCTGCCAGCCAGAGgtGTAAAAAGTACTGAATCGTCATACTGGAGTAAAGGTAAATGCTACGCATCAAATTCCTCTATagtaagcaaaccagacggcacaatttatATCATTATTTGACAGCTAGGGGCACATTCCaaaactcagacatcatttacaaacaaagcatttatgtttagtgagtctgtcagatcagaggcagtagggaggaccagggacgttctcttgataagtgtgtgaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1511251 True 306 lncRNA 0.41 2 71924883 71925920

Neighbor

gene id symbol gene type direction distance location
LOC110490816 LOC106609794 coding upstream 146180 71764771 ~ 71778703 (+)
LOC110490815 LOC106576513 coding upstream 161440 71738171 ~ 71763443 (+)
LOC110490715 zcrb1 coding upstream 187692 71734459 ~ 71737191 (+)
LOC110499701 LOC106576510 coding upstream 239272 71630292 ~ 71685611 (+)
LOC110499745 LOC106576507 coding upstream 436413 71478469 ~ 71488470 (+)
LOC118938841 NA coding downstream 48690 71973676 ~ 71976465 (+)
LOC118938842 NA coding downstream 92797 72018717 ~ 72019300 (+)
LOC118938843 NA coding downstream 127840 72053760 ~ 72054124 (+)
LOC110490794 LOC106598106 coding downstream 275047 72200967 ~ 72203946 (+)
si:ch73-139j3.4 NA coding downstream 303699 72229619 ~ 72236599 (+)
G1323724 NA non-coding upstream 124300 71800351 ~ 71800583 (+)
G1323722 NA non-coding upstream 124940 71799678 ~ 71799943 (+)
G1323720 NA non-coding upstream 127701 71796840 ~ 71797182 (+)
G1323719 NA non-coding upstream 128509 71796052 ~ 71796374 (+)
G1323588 NA non-coding upstream 148091 71776113 ~ 71776792 (+)
G1323862 LOC100380742 non-coding downstream 65072 71990992 ~ 71994632 (+)
G1323868 LOC100380742 non-coding downstream 71881 71997801 ~ 71998665 (+)
G1323871 NA non-coding downstream 75101 72001021 ~ 72002850 (+)
G1323873 NA non-coding downstream 81115 72007035 ~ 72008624 (+)
G1322763 NA other upstream 987738 70936225 ~ 70937145 (+)
G1322725 NA other upstream 1076939 70843945 ~ 70847944 (+)
G1322161 NA other upstream 2021225 69900944 ~ 69903658 (+)
G1322119 NA other upstream 2125021 69798196 ~ 69799862 (+)
G1321053 NA other upstream 3128902 68794598 ~ 68795981 (+)
G1323962 NA other downstream 264503 72190423 ~ 72191163 (+)
LOC110531894 LOC106598741 other downstream 530297 72416050 ~ 72481441 (+)
LOC110490361 LOC106609821 other downstream 816293 72742193 ~ 72850175 (+)
G1324156 LOC106576365 other downstream 927646 72853566 ~ 72856022 (+)
G1324195 NA other downstream 934900 72860820 ~ 72865809 (+)

Expression


Co-expression Network