G1323886


Basic Information

Item Value
gene id G1323886
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 72033273 ~ 72034362 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1511344
TGGTAGAACATGCAGACAGatctacagtagctatctatcagGGTCTAGTAACTGGTAGGACATGCAGACAGatctacagtagctatctatcagGGTCTAGTAACTGGTAGAACATGCAGACAGATCTACAGTAGATACTGTATCTATCAGGGTCTAGTAACTGGTAGAACATGCAGACAGatctacagtagctatctatcagGGTCTAGTAACTGGTAGAACATGCAGACAGatctacagtagctatctatcagGGTCTAGTAACTGGTAGAACATGCAGACAGatctacagtagctatctatcagGGTCTAGTAACTGGTAGAACATGCAGACAGataACAGTAGATATCTATCAGGGTCTAGTAACTGGTAGAACATGCAGACAGATCTACAGTAGATATCTATCAGGGTCTAGTAACTGGTAGAACATGCAGACAGatctacagtagctatctatcagGGTCTAGTAACTGGTAGAACATGCAGACAGatctacagtagctatctatcagGGTCTAGTAACTGGTAGAACATGCAGGTGCCTCCGCTGAGAGACTTATTTTACCTTTGAACACATCTACTATGGGTTGCTGAATAAAGGcttcagagagaagaggagaaagagaaagagaggaataaagagagacagagagaagagaagacaaaCACAGGCAGAGGGGATGTAAGTAGGTGAGCAAGGAAAAAGTACAACTAGATCCTACCGTGTTCCCATTTTAAAGACAAAGTATTTTTTCACCAGGTTCACGCAAAACAGAATGATTCACTACAGGTGGAACAACACGGGGGACAGTTTTACCACGCTGGAAC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1511344 True 829 lncRNA 0.42 2 72033273 72034362

Neighbor

gene id symbol gene type direction distance location
LOC118938842 NA coding upstream 13973 72018717 ~ 72019300 (+)
LOC118938841 NA coding upstream 57124 71973676 ~ 71976465 (+)
LOC110490816 LOC106609794 coding upstream 254570 71764771 ~ 71778703 (+)
LOC110490815 LOC106576513 coding upstream 269830 71738171 ~ 71763443 (+)
LOC110490715 zcrb1 coding upstream 296082 71734459 ~ 71737191 (+)
LOC118938843 NA coding downstream 19398 72053760 ~ 72054124 (+)
LOC110490794 LOC106598106 coding downstream 166605 72200967 ~ 72203946 (+)
si:ch73-139j3.4 NA coding downstream 195257 72229619 ~ 72236599 (+)
LOC118938845 NA coding downstream 202568 72236930 ~ 72238063 (+)
LOC110516855 typh coding downstream 203874 72238236 ~ 72241900 (+)
G1323882 NA non-coding upstream 14636 72017758 ~ 72018637 (+)
G1323879 NA non-coding upstream 20391 72012545 ~ 72012882 (+)
G1323873 NA non-coding upstream 24649 72007035 ~ 72008624 (+)
G1323871 NA non-coding upstream 30423 72001021 ~ 72002850 (+)
G1323868 LOC100380742 non-coding upstream 34608 71997801 ~ 71998665 (+)
G1323894 NA non-coding downstream 12041 72046403 ~ 72047343 (+)
G1323899 NA non-coding downstream 21038 72055400 ~ 72056378 (+)
G1323904 NA non-coding downstream 31613 72065975 ~ 72067581 (+)
G1323905 NA non-coding downstream 35359 72069721 ~ 72071674 (+)
G1323906 NA non-coding downstream 35769 72070131 ~ 72070688 (+)
G1322763 NA other upstream 1096128 70936225 ~ 70937145 (+)
G1322725 NA other upstream 1185329 70843945 ~ 70847944 (+)
G1322161 NA other upstream 2129615 69900944 ~ 69903658 (+)
G1322119 NA other upstream 2233411 69798196 ~ 69799862 (+)
G1321053 NA other upstream 3237292 68794598 ~ 68795981 (+)
G1323962 NA other downstream 156061 72190423 ~ 72191163 (+)
LOC110531894 LOC106598741 other downstream 421855 72416050 ~ 72481441 (+)
LOC110490361 LOC106609821 other downstream 707851 72742193 ~ 72850175 (+)
G1324156 LOC106576365 other downstream 819204 72853566 ~ 72856022 (+)
G1324195 NA other downstream 826458 72860820 ~ 72865809 (+)

Expression


Co-expression Network