Gene
RNA
| Item | Value |
|---|---|
| gene id | G1323894 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 72046403 ~ 72047343 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1511352 | False | 700 | lncRNA | 0.43 | 3 | 72046403 | 72047343 |
| TU1511353 | True | 221 | lncRNA | 0.40 | 4 | 72046921 | 72047343 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118938842 | NA | coding | upstream | 27103 | 72018717 ~ 72019300 (+) |
| LOC118938841 | NA | coding | upstream | 70254 | 71973676 ~ 71976465 (+) |
| LOC110490816 | LOC106609794 | coding | upstream | 267700 | 71764771 ~ 71778703 (+) |
| LOC110490815 | LOC106576513 | coding | upstream | 282960 | 71738171 ~ 71763443 (+) |
| LOC110490715 | zcrb1 | coding | upstream | 309212 | 71734459 ~ 71737191 (+) |
| LOC118938843 | NA | coding | downstream | 6417 | 72053760 ~ 72054124 (+) |
| LOC110490794 | LOC106598106 | coding | downstream | 153624 | 72200967 ~ 72203946 (+) |
| si:ch73-139j3.4 | NA | coding | downstream | 182276 | 72229619 ~ 72236599 (+) |
| LOC118938845 | NA | coding | downstream | 189587 | 72236930 ~ 72238063 (+) |
| LOC110516855 | typh | coding | downstream | 190893 | 72238236 ~ 72241900 (+) |
| G1323886 | NA | non-coding | upstream | 12041 | 72033273 ~ 72034362 (+) |
| G1323882 | NA | non-coding | upstream | 27766 | 72017758 ~ 72018637 (+) |
| G1323879 | NA | non-coding | upstream | 33521 | 72012545 ~ 72012882 (+) |
| G1323873 | NA | non-coding | upstream | 37779 | 72007035 ~ 72008624 (+) |
| G1323871 | NA | non-coding | upstream | 43553 | 72001021 ~ 72002850 (+) |
| G1323899 | NA | non-coding | downstream | 8057 | 72055400 ~ 72056378 (+) |
| G1323904 | NA | non-coding | downstream | 18632 | 72065975 ~ 72067581 (+) |
| G1323905 | NA | non-coding | downstream | 22378 | 72069721 ~ 72071674 (+) |
| G1323906 | NA | non-coding | downstream | 22788 | 72070131 ~ 72070688 (+) |
| G1323921 | NA | non-coding | downstream | 55775 | 72103118 ~ 72103412 (+) |
| G1322763 | NA | other | upstream | 1109258 | 70936225 ~ 70937145 (+) |
| G1322725 | NA | other | upstream | 1198459 | 70843945 ~ 70847944 (+) |
| G1322161 | NA | other | upstream | 2142745 | 69900944 ~ 69903658 (+) |
| G1322119 | NA | other | upstream | 2246541 | 69798196 ~ 69799862 (+) |
| G1321053 | NA | other | upstream | 3250422 | 68794598 ~ 68795981 (+) |
| G1323962 | NA | other | downstream | 143080 | 72190423 ~ 72191163 (+) |
| LOC110531894 | LOC106598741 | other | downstream | 408874 | 72416050 ~ 72481441 (+) |
| LOC110490361 | LOC106609821 | other | downstream | 694870 | 72742193 ~ 72850175 (+) |
| G1324156 | LOC106576365 | other | downstream | 806223 | 72853566 ~ 72856022 (+) |
| G1324195 | NA | other | downstream | 813477 | 72860820 ~ 72865809 (+) |
