G1323904


Basic Information

Item Value
gene id G1323904
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 72065975 ~ 72067581 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1511364
TTAATGATACCTCATCAGGATAGCAGGTATTGGTATGGGAGTGTTATTAATGATACCTCATCAGGATAGCAGgtattggtatgggagtgttattaatgttacctcatcaggaTAGCAGGTATTGGTATGGGAGTGTTATTAATGTTACCTCATCGGGATAGCAGGTATTGGTATGGGAGTGttaataatgttacctcatcaggatagcaggtattggtatgggagtgttattaatgttacctcatcaggaTAGCAGGTATTGGTATGGGAGTGTTattaatgttacctcatcaggatagcaggtattggtatgggagtgttaataatgttacctcatcaggatagcaggtattggtatgggagtgttattaatgttacctcatcaggatagcaggtattggtatgggagtgttaataatgttacctcatcaggaTAGCAGGAGTGTTattaatgttacctcatcaggatagcatgtattggtatgggagtgtTAATAATGATACCTCATCAGGATAGCAGGTATTGGTATGGGAGTGTTattaatgttacctcatcaggaAAGCAGCTATTGGTATGGGAGTGTTattaatgttacctcatcaggaTAGCAtcacatctctcctcctctttaccatTAGCCAGTGTGTGGAATGTCATTCACCTATTCATTTCAGCCAATGAACATGGCACACTAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1511364 True 697 lncRNA 0.39 3 72065975 72067581

Neighbor

gene id symbol gene type direction distance location
LOC118938843 NA coding upstream 11851 72053760 ~ 72054124 (+)
LOC118938842 NA coding upstream 46675 72018717 ~ 72019300 (+)
LOC118938841 NA coding upstream 89826 71973676 ~ 71976465 (+)
LOC110490816 LOC106609794 coding upstream 287272 71764771 ~ 71778703 (+)
LOC110490815 LOC106576513 coding upstream 302532 71738171 ~ 71763443 (+)
LOC110490794 LOC106598106 coding downstream 133386 72200967 ~ 72203946 (+)
si:ch73-139j3.4 NA coding downstream 162038 72229619 ~ 72236599 (+)
LOC118938845 NA coding downstream 169349 72236930 ~ 72238063 (+)
LOC110516855 typh coding downstream 170655 72238236 ~ 72241900 (+)
LOC118938844 typh coding downstream 184322 72251903 ~ 72256569 (+)
G1323899 NA non-coding upstream 9597 72055400 ~ 72056378 (+)
G1323894 NA non-coding upstream 18632 72046403 ~ 72047343 (+)
G1323886 NA non-coding upstream 31613 72033273 ~ 72034362 (+)
G1323882 NA non-coding upstream 47338 72017758 ~ 72018637 (+)
G1323879 NA non-coding upstream 53093 72012545 ~ 72012882 (+)
G1323905 NA non-coding downstream 2140 72069721 ~ 72071674 (+)
G1323906 NA non-coding downstream 2550 72070131 ~ 72070688 (+)
G1323921 NA non-coding downstream 35537 72103118 ~ 72103412 (+)
G1323949 NA non-coding downstream 96170 72163751 ~ 72164434 (+)
G1323951 NA non-coding downstream 100463 72168044 ~ 72172555 (+)
G1322763 NA other upstream 1128830 70936225 ~ 70937145 (+)
G1322725 NA other upstream 1218031 70843945 ~ 70847944 (+)
G1322161 NA other upstream 2162317 69900944 ~ 69903658 (+)
G1322119 NA other upstream 2266113 69798196 ~ 69799862 (+)
G1321053 NA other upstream 3269994 68794598 ~ 68795981 (+)
G1323962 NA other downstream 122842 72190423 ~ 72191163 (+)
LOC110531894 LOC106598741 other downstream 388636 72416050 ~ 72481441 (+)
LOC110490361 LOC106609821 other downstream 674632 72742193 ~ 72850175 (+)
G1324156 LOC106576365 other downstream 785985 72853566 ~ 72856022 (+)
G1324195 NA other downstream 793239 72860820 ~ 72865809 (+)

Expression


Co-expression Network