XLOC_032179 (slc9a7)


Basic Information

Item Value
gene id XLOC_032179
gene name slc9a7
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 37529383 ~ 37600648 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00062870
ATGCCCATTATTGCCTGTGACTGTACCTGACGCAGCTGAAGCAGTGAGTGAGGAAACCCGCCGCCAGCATCCTGCACCATGGAGGCGGCCAAAGCACCAAAGCCATGGACGTTATATTTACCGAATCCCAGCTCGCTGTTTCCTCTCTTCGTGTTCATTTTAAGCCAATGTTATCGGATAAGCGCAGACGACGGCGGCATAGAAGAACTTGCAACGGAGAAAGAAGCAGAGGAAAGTCACAGGCAGGACAGCGTGAATTTACTCACATTCATTTTGCTTTTGACACTCACTATACTCACAATATGGCTCTTCAAACACAGAAGAGTGCGCTTCCTGCACGAAACCGGACTGGCAATGATATACGGTCTGTTGGTGGGTGTTATTTTGAGGTATGGCATTCCCTCCACCAGCTACCATAATAAAACTCCTCCGAGCTGCATGCTGAAGGAGGGTCCTGTCAGCACTGTGCTTCTCAATGTTAGCGGGAAGTTCTTTGAATACACGCTCAAAGGGGAGATCAACCTTCGAGAAATCCACAGTGTGGAGCAGAATGACATGTTGCGCAAGCTGACCTTTGACCCAGAGGTTTTCTTCAATATTCTGCTACCTCCCATCATTTTCCATGCCGGATACAGCCTCAAGAAGaGACACTTCTTCAGGAACCTGGGATCCATCATAACGTATGCCTTCCTGGGCACTGCAATTTCCTGTTTTGTCATCGGAAACCTCATGTATGGCGTGGTAAAACTGATGCAGGTTTTGGGTCAACTCACAGACAAGTTTTACTACACGGACTGTCTGTTTTTTGGTGCCATCATATCTGCCACAGACCCAGTCACCGTGCTTGCGATCTTTAATGAGCTCCATGCTGATGGGGATCTCTACGCTCTGCTGTTTGGAGAGAGTGTCATGAACGATGCGGTCTCCATAGTGCTTTCATCGTCGATTGTGGCATATCAGCCTTCAggagccaacacacacacattcgatGCCTCTGCCTTCTTCAAATCGGTGGGCGTCTTCATAGGCATCTTCAGCGGCTCTTTTGCTATGGGTGCAGTCACTGGTGTGGTCACCGCGCTTGTGACAAAATTCACCAAGCTGCACTGTTTTCCTCTACTGGAGACGGCTTTGTTCTTCCTCATGTCCTGGAGTACTTTTCTACTGGCTGAAGCATGTGGCTTCACAGGTGTTGTCGCTGTGCTGTTTTGTGGAATCACACAAGCTCACTATACCTACAACAATCTCTCAGAGGAGTCGACCAAACGCACTAAACAGTTGTTTGAGGTGTTGCACTTCCTGGCTGAGAACTTCATCTTCTCCTACATGGGCCTAGCACTCTTCACTTTCCAGAATCACGTCTTCAGCCCTATTTTCATAGTTGGAGCCTTTCTAGCCATCTTCATCGGCCGGGCCTTGAACATCTACCCCTTATCTTTTCTGATTAACCTGGGCCGAAGACACAAAATCCGAGGAAACTTTCAGCACATGATGATGTTCGCAGGGCTGCGAGGGGCTATGGCGTTCGCTCTGGCCATTCGTGACACTGCCACATACGCGCGGCAGATGATGTTCACTACGACCCTGCTCATTGTGTTCTTCACAGTGTGGGTGTTCGGAGGAGGCACCACGCCAATGCTATCCTGGCTGCACATCAGGGTTGGAGAGTCTTCTGATGCTGAGAAGGAGAGGATGCGTAGACTGTGGAATTACGACAGCAGAGTTGGAGTGGACCCCGATCAGGATCTTCAGCCATGCGGGGACAGCTTCCAGGTCCTTCAGGGAGATGGGAGCCAGTCAGAAGGGCAGAGCAAGACCAAGCAGGAGAGCGCCTGGCTTTTCAGACTTTGGTATACTTTTGACCACAATTACCTGAAGCCTATCCTGACCCATAGCGGACCCCCTCTGACCTCCACCCTGCCCGCCTGCTGCGGCCCATTGGCTCGATGTCTGACCAGCCCTCAAGCATATGAGACCCATGAGCCGCTGCGGGACAATGACTCAGACCTCATCTTGAACGAAGGAGACCTGACGCTGACCTACGGCGACACCGCCATCACAGCCAACGGAGCCTCATCCTCCTCTGGTCCCGAAGGGTCGGCTGGGATCTGGGGCCTGAATGGCAAACGCAGCGACAGCACGTCAGAAGACGCTCTGGAGAGAGAACTGGACACGCGTGAACATGAGCTGTTGAGCCGCGGCACACGTCTGGTTTTCCCCATCGAGGACCACGCTTGAACTCACCACCCATTCCTCAAACACCCCGCACTCCATACCTCCTCTCATATTGCACACCGCTCCATCCGACCATCCACAAACATCTCAAGACGGGGGGCTGAAATTTCAAGGAAACGGATGGGTTTGTGCTCTAGATGAGTTTGTTTACCAGAATGGAGGTGTCGAAGCTGTGGTAGGTTGAGTTTCTCCTCATGGAAATGTGGAGGAAAAGGAAAGCTTTGGAATAAGCTTTCGTTTATGATCATTAAATGACACTGACACATTCAGACATTCACACACGCAGCATTTATCATACATTACGCCATTATTACTTTGTTTAGCATTGCTGCTACAAACCGGAAATATGACTGAGCCAGTTTTTCTCTTGAAAAATTCAGGTTTTTTATGTATGAGCAGTCAGTATTAttaatcatttgcatttaaatgctCCTCTTCGCCGTCAGGCAAATGAGCAAGCAGCTCATCATATCTGTAAATACGCCAGACTGTACGTGGTGGTGGTGTTCGGTAAAATCCCTCGAACACAATGGGATCATTGTTTGATATGCGTGCATGTTCATCTCATGACTGCATACAGGATCCTTGTAATACTCAGCTCCAAGTGAGTTGTGGTTTACATTTCCTCTTGATATCTTGGTTGTCAACACCAACTTGATGTAAATATGAATGTTGATCTGCACAGTTGTGGgatttctttcctttttattcGATAAAACAGCTGGATGCAACCGGAGTGTATAAACCATGCACTTTAGCTGCAGTTGAGCTGCAGTCCTTGCATGTTTTGCTTTATTATATTGGATTATTAACCACTTGCACAGTCTGAAATTGTGACGTGAGATGATCGAAGAAGGTTTttagtgaatgcgtgtgtgtgtgtggcttgtCTTTTGAGCCTCTTCACATGCAGATCTTGTAGGAGTTGCTGCTATATGGCAACTTAACGATTCCGAAATCTGAAACATTTGGCATGACGTTGACCCGGCTGTTGAGTCTTTTCATAGAGTAAACAGATTCCATCAACCGCCAATGCAGATTCTTTCTATCCTCTGAGTCTAGAATTGAATTATGCTTGCTGTTAATGAATGCAAGTTTAAAGTCCGAACATTTGGTTAATAACTAACTCAGATGTTTGAAATAAGACTTCATTCCACTTGATGAACTAACCTTGGACTCCTTCGATTTAATAGCCTTTTACGACTGTCTCAATAGTCCGTGCCTGTCTGTCGTTTGCTTTTTAAGCTGTGAAAAGATGCCTCACCTTCAATGTCATCCACAGTATCTAGTTCAAAACCTAAATGTGAATTGAGATTTGCACTAATGAATGGAGATTTGGCTAGATAATGAGCGTTATGGGCTTTGTGGCAATTGAACAACCTTAAACTGGCTGTAGCAAAAGACTAAGTCACTCTCATGAATGGCTCCTCCGACGTGTCTGAAATGGGTTTTTTCTTGAACATTCTATGGTGGACTTGTGTGTACCTTCAGGATATGTAACTCTTTCCTGTAGCATTCATCTTTTACTTGCTGTTCTGCATGTACGTATCTGccatataaacaacaacaaagcatAATCAAGCTGCCATTTTTTAATGTCTATGATGCTAATTCCCCTCCTCACGCGAATccctattatttataataatatgattaatattataCATAAAGATGCATTCTTCTTGTCAAATAAAGTGACAACTGTGGTATGCATTGTAGCTTAACCAATTGTACATTCATGAAAATAGCCAATGTATCAAAGCGGGCTTCAGTAGCAATGCCTAAATAAGGTATTTGGTTTCTTTTCTATGTCATTcgaaaatactactactaataataataataaaacaagaaactaGTGTTTACTACAAAA
>TCONS_00062869
ATGCCCATTATTGCCTGTGACTGTACCTGACGCAGCTGAAGCAGTGAGTGAGGAAACCCGCCGCCAGCATCCTGCACCATGGAGGCGGCCAAAGCACCAAAGCCATGGACGTTATATTTACCGAATCCCAGCTCGCTGTTTCCTCTCTTCGTGTTCATTTTAAGCCAATGTTATCGGATAAGCGCAGACGACGGCGGCATAGAAGAACTTGCAACGGAGAAAGAAGCAGAGGAAAGTCACAGGCAGGACAGCGTGAATTTACTCACATTCATTTTGCTTTTGACACTCACTATACTCACAATATGGCTCTTCAAACACAGAAGAGTGCGCTTCCTGCACGAAACCGGACTGGCAATGATATACGGTCTGTTGGTGGGTGTTATTTTGAGGTATGGCATTCCCTCCACCAGCTACCATAATAAAACTCCTCCGAGCTGCATGCTGAAGGAGGGTCCTGTCAGCACTGTGCTTCTCAATGTTAGCGGGAAGTTCTTTGAATACACGCTCAAAGGGGAGATCAACCTTCGAGAAATCCACAGTGTGGAGCAGAATGACATGTTGCGCAAGCTGACCTTTGACCCAGAGGTTTTCTTCAATATTCTGCTACCTCCCATCATTTTCCATGCCGGATACAGCCTCAAGAAGaGACACTTCTTCAGGAACCTGGGATCCATCATAACGTATGCCTTCCTGGGCACTGCAATTTCCTGTTTTGTCATCGGAAACCTCATGTATGGCGTGGTAAAACTGATGCAGGTTTTGGGTCAACTCACAGACAAGTTTTACTACACGGACTGTCTGTTTTTTGGTGCCATCATATCTGCCACAGACCCAGTCACCGTGCTTGCGATCTTTAATGAGCTCCATGCTGATGGGGATCTCTACGCTCTGCTGTTTGGAGAGAGTGTCATGAACGATGCGGTCTCCATAGTGCTTTCATCGTCGATTGTGGCATATCAGCCTTCAggagccaacacacacacattcgatGCCTCTGCCTTCTTCAAATCGGTGGGCGTCTTCATAGGCATCTTCAGCGGCTCTTTTGCTATGGGTGCAGTCACTGGTGTGGTCACCGCGCTTGTGACAAAATTCACCAAGCTGCACTGTTTTCCTCTACTGGAGACGGCTTTGTTCTTCCTCATGTCCTGGAGTACTTTTCTACTGGCTGAAGCATGTGGCTTCACAGGTGTTGTCGCTGTGCTGTTTTGTGGAATCACACAAGCTCACTATACCTACAACAATCTCTCAGAGGAGTCGACCAAACGCACTAAACAGTTGTTTGAGGTGTTGCACTTCCTGGCTGAGAACTTCATCTTCTCCTACATGGGCCTAGCACTCTTCACTTTCCAGAATCACGTCTTCAGCCCTATTTTCATAGTTGGAGCCTTTCTAGCCATCTTCATCGGCCGGGCCTTGAACATCTACCCCTTATCTTTTCTGATTAACCTGGGCCGAAGACACAAAATCCGAGGAAACTTTCAGCACATGATGATGTTCGCAGGGCTGCGAGGGGCTATGGCGTTCGCTCTGGCCATTCGTGACACTGCCACATACGCGCGGCAGATGATGTTCACTACGACCCTGCTCATTGTGTTCTTCACAGTGTGGGTGTTCGGAGGAGGCACCACGCCAATGCTATCCTGGCTGCACATCAGGGTTGGAGAGTCTTCTGATGCTGAGAAGGAGAGGATGCGTAGACTGTGGAATTACGACAGAGTTGGAGTGGACCCCGATCAGGATCTTCAGCCATGCGGGGACAGCTTCCAGGTCCTTCAGGGAGATGGGAGCCAGTCAGAAGGGCAGAGCAAGACCAAGCAGGAGAGCGCCTGGCTTTTCAGACTTTGGTATACTTTTGACCACAATTACCTGAAGCCTATCCTGACCCATAGCGGACCCCCTCTGACCTCCACCCTGCCCGCCTGCTGCGGCCCATTGGCTCGATGTCTGACCAGCCCTCAAGCATATGAGACCCATGAGCCGCTGCGGGACAATGACTCAGACCTCATCTTGAACGAAGGAGACCTGACGCTGACCTACGGCGACACCGCCATCACAGCCAACGGAGCCTCATCCTCCTCTGGTCCCGAAGGGTCGGCTGGGATCTGGGGCCTGAATGGCAAACGCAGCGACAGCACGTCAGAAGACGCTCTGGAGAGAGAACTGGACACGCGTGAACATGAGCTGTTGAGCCGCGGCACACGTCTGGTTTTCCCCATCGAGGACCACGCTTGAACTCACCACCCATTCCTCAAACACCCCGCACTCCATACCTCCTCTCATATTGCACACCGCTCCATCCGACCATCCACAAACATCTCAAGACGGGGGGCTGAAATTTCAAGGAAACGGATGGGTTTGTGCTCTAGATGAGTTTGTTTACCAGAATGGAGGTGTCGAAGCTGTGGTAGGTTGAGTTTCTCCTCATGGAAATGTGGAGGAAAAGGAAAGCTTTGGAATAAGCTTTCGTTTATGATCATTAAATGACACTGACACATTCAGACATTCACACACGCAGCATTTATCATACATTACGCCATTATTACTTTGTTTAGCATTGCTGCTACAAACCGGAAATATGACTGAGCCAGTTTTTCTCTTGAAAAATTCAGGTTTTTTATGTATGAGCAGTCAGTATTAttaatcatttgcatttaaatgctCCTCTTCGCCGTCAGGCAAATGAGCAAGCAGCTCATCATATCTGTAAATACGCCAGACTGTACGTGGTGGTGGTGTTCGGTAAAATCCCTCGAACACAATGGGATCATTGTTTGATATGCGTGCATGTTCATCTCATGACTGCATACAGGATCCTTGTAATACTCAGCTCCAAGTGAGTTGTGGTTTACATTTCCTCTTGATATCTTGGTTGTCAACACCAACTTGATGTAAATATGAATGTTGATCTGCACAGTTGTGGgatttctttcctttttattcGATAAAACAGCTGGATGCAACCGGAGTGTATAAACCATGCACTTTAGCTGCAGTTGAGCTGCAGTCCTTGCATGTTTTGCTTTATTATATTGGATTATTAACCACTTGCACAGTCTGAAATTGTGACGTGAGATGATCGAAGAAGGTTTttagtgaatgcgtgtgtgtgtgtggcttgtCTTTTGAGCCTCTTCACATGCAGATCTTGTAGGAGTTGCTGCTATATGGCAACTTAACGATTCCGAAATCTGAAACATTTGGCATGACGTTGACCCGGCTGTTGAGTCTTTTCATAGAGTAAACAGATTCCATCAACCGCCAATGCAGATTCTTTCTATCCTCTGAGTCTAGAATTGAATTATGCTTGCTGTTAATGAATGCAAGTTTAAAGTCCGAACATTTGGTTAATAACTAACTCAGATGTTTGAAATAAGACTTCATTCCACTTGATGAACTAACCTTGGACTCCTTCGATTTAATAGCCTTTTACGACTGTCTCAATAGTCCGTGCCTGTCTGTCGTTTGCTTTTTAAGCTGTGAAAAGATGCCTCACCTTCAATGTCATCCACAGTATCTAGTTCAAAACCTAAATGTGAATTGAGATTTGCACTAATGAATGGAGATTTGGCTAGATAATGAGCGTTATGGGCTTTGTGGCAATTGAACAACCTTAAACTGGCTGTAGCAAAAGACTAAGTCACTCTCATGAATGGCTCCTCCGACGTGTCTGAAATGGGTTTTTTCTTGAACATTCTATGGTGGACTTGTGTGTACCTTCAGGATATGTAACTCTTTCCTGTAGCATTCATCTTTTACTTGCTGTTCTGCATGTACGTATCTGccatataaacaacaacaaagcatAATCAAGCTGCCATTTTTTAATGTCTATGATGCTAATTCCCCTCCTCACGCGAATccctattatttataataatatgattaatattataCATAAAGATGCATTCTTCTTGTCAAATAAAGTGACAACTGTGGTATGCATTGTAGCTTAACCAATTGTACATTCATGAAAATAGCCAATGTATCAAAGCGGGCTTCAGTAGCAATGCCTAAATAAGGTATTTGGTTTCTTTTCTATGTCATTcgaaaatactactactaataataataataaaacaagaaactaGTGTTTACTACAAAA
>TCONS_00062871
GTGACTGTACCTGACGCAGCTGAAGCAGTGAGTGAGGAAACCCGCCGCCAGCATCCTGCACCATGGAGGCGGCCAAAGCACCAAAGCCATGGACGTTATATTTACCGAATCCCAGCTCGCTGTTTCCTCTCTTCGTGTTCATTTTAAGCCAATGTTATCGGATAAGCGCAGACGACGGCGGCATAGAAGAACTTGCAACGGAGAAAGAAGCAGAGGAAAGTCACAGGCAGGACAGCGTGAATTTACTCACATTCATTTTGCTTTTGACACTCACTATACTCACAATATGGCTCTTCAAACACAGAAGAGTGCGCTTCCTGCACGAAACCGGACTGGCAATGATATACGGTGAGAAATCCGTCTTTTTAACATTGCGAAAGACGTCAGACATCGTCTGTGTTTTAAAACCGAGCGAGTCTCCGAGCGTGACAGCGTTTTTTTTCTTGCGGAAATAGTATCGAGTCATgaggtttgaatattttttagTCGCACATTTTTTTGCGCATTTTCTTTCTAACCAGGTAGCTTGTTAGGTTTTGAGACACAACCGTCACGTTAAACCTTAGCTAACGTTAAGCCTGGTATGAATGAGCCCATGTAGCTTGCTAGCTTGAACGAGTGCTAATACAAACCCCGTGGACCGAATATCATCATATTTCAATGTGCTGTTGAAATATTACTGCGTTCCTTGTGGTTTTGCATGGTGACTTTTCAAAATGATCGTGGCTGATAACAAGATGACACATGTCTGTGTTTTGATATTGCATAATGATATGCGTAAACTGTTTTTTAGGGTCTCTTATACGCCTTGGTTTAATTTCTTTATGTGTTTCAGTCATAACTCCACGACATAACTCCACGTTGTCAGTTCCTCATTCTGGCTTTGAGTGCTGTCAGCTTTTGCATTTCAGGTTTGAACAATCCACAGAAACATGTCATGCCTTCTAGGTCAAGAGTCAGCAAACAGATTGGAAGGTCTAAAAATTGCCTTCCTCACCATAAACATGTTGCACATGTTTTTAATCTGTGGAGCACCAAATGGGGATAATTTCTGATTAATTTTACTGGACTGTATTTTCCAAAAGCATCTTAAGCTTAAGTTGATCATAGCTCAAGTGACAATGGTTCTACGATTAGCCTATAGTTTTGCGATTTATTTTGGGAAAGGCAGCTCTGGTTTGAACAATTCCAGGATTATGGATATGATATTTGCAGTAAACTCATAGAGAAAGTACATGTAAAGCATTATATTGAaacttctgtttttattttactaagcaactcaccacagagttatgggatcagaaaaacatcaatctgcaaacatttttcagatttaaaataagggaaataaacatgcatcatggatgtgaccaaaacaacatactttgtaagaattctgtgaattaaactgcacaaccc

Function

symbol description
slc9a7 Predicted to enable potassium:proton antiporter activity and sodium:proton antiporter activity. Predicted to be involved in potassium ion transmembrane transport; regulation of intracellular pH; and sodium ion import across plasma membrane. Predicted to act upstream of or within regulation of pH; sodium ion transport; and transmembrane transport. Predicted to be located in endosome membrane. Predicted to be integral component of membrane. Predicted to be active in plasma membrane and recycling endosome. Is expressed in female organism; gill; and testis. Human ortholog(s) of this gene implicated in X-linked intellectual developmental disorder 108. Orthologous to human SLC9A7 (solute carrier family 9 member A7).

GO:

id name namespace
GO:0006885 regulation of pH biological_process
GO:0071805 potassium ion transmembrane transport biological_process
GO:0051453 regulation of intracellular pH biological_process
GO:0055085 transmembrane transport biological_process
GO:0098719 sodium ion import across plasma membrane biological_process
GO:0006811 ion transport biological_process
GO:0006812 cation transport biological_process
GO:0006814 sodium ion transport biological_process
GO:0055037 recycling endosome cellular_component
GO:0005886 plasma membrane cellular_component
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0015297 antiporter activity molecular_function
GO:0015299 solute molecular_function
GO:0015385 sodium molecular_function
GO:0015386 potassium molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-050913-8 Predicted to enable potassium:proton antiporter activity and sodium:proton antiporter activity. Predicted to be involved in potassium ion transmembrane transport; regulation of intracellular pH; and sodium ion import across plasma membrane. Predicted to act upstream of or within regulation of pH; sodium ion transport; and transmembrane transport. Predicted to be located in endosome membrane. Predicted to be integral component of membrane. Predicted to be active in plasma membrane and recycling endosome. Is expressed in female organism; gill; and testis. Human ortholog(s) of this gene implicated in X-linked intellectual developmental disorder 108. Orthologous to human SLC9A7 (solute carrier family 9 member A7).

Ensembl:

ensembl_id ENSDARG00000076754

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00062870 False 4108 mRNA 0.46 17 37529383 37600648
TCONS_00062869 False 4105 mRNA 0.46 17 37529383 37600648
TCONS_00062871 True 1422 mRNA 0.40 1 37529399 37530820

Neighbor

gene id symbol gene type direction distance location
XLOC_032178 NA coding upstream 53282 37470116 ~ 37476101 (+)
XLOC_032177 gtpbp6 coding upstream 74473 37441789 ~ 37454910 (+)
XLOC_032176 BX324166.1 coding upstream 194420 37334559 ~ 37334963 (+)
XLOC_032175 NA coding upstream 213474 37314337 ~ 37315909 (+)
XLOC_032174 ptger3 coding upstream 218334 37308716 ~ 37311049 (+)
XLOC_032180 tubgcp5 coding downstream 23045 37623693 ~ 37652517 (+)
XLOC_032181 cyfip1 coding downstream 54430 37655078 ~ 37730907 (+)
XLOC_032182 herc2 coding downstream 152133 37752781 ~ 37847875 (+)
XLOC_032183 oca2 coding downstream 293572 37894220 ~ 38054851 (+)
XLOC_032184 AL935047.1 coding downstream 486847 38087495 ~ 38087611 (+)
XLOC_032172 NA non-coding upstream 279019 37184193 ~ 37250364 (+)
XLOC_032171 BX950870.1 non-coding upstream 538699 36990570 ~ 36990684 (+)
XLOC_032185 NA non-coding downstream 758033 38358681 ~ 38360443 (+)
XLOC_032186 CR405707.1 non-coding downstream 776443 38377091 ~ 38377211 (+)
XLOC_032188 CR628341.3 non-coding downstream 917571 38518219 ~ 38590172 (+)
XLOC_032194 NA non-coding downstream 1352833 38953481 ~ 38955126 (+)

Expression


Co-expression Network