Gene
RNA
| Item | Value |
|---|---|
| gene id | G1324467 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 72156594 ~ 72157245 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1512154 | False | 652 | lncRNA | 0.44 | 1 | 72156594 | 72157245 |
| TU1512155 | True | 378 | lncRNA | 0.46 | 1 | 72156594 | 72156971 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110500989 | LOC106576674 | coding | downstream | 5598 | 72022817 ~ 72150996 (-) |
| LOC110490787 | LOC106593403 | coding | downstream | 139546 | 71984728 ~ 72017048 (-) |
| LOC118938840 | LOC106576579 | coding | downstream | 233331 | 71841725 ~ 71923263 (-) |
| LOC110490714 | LOC106593546 | coding | downstream | 422151 | 71687880 ~ 71734443 (-) |
| LOC118938900 | NA | coding | downstream | 885422 | 71270357 ~ 71271172 (-) |
| LOC110490626 | LOC106576575 | coding | upstream | 5416 | 72162661 ~ 72192809 (-) |
| LOC110499794 | LOC106609728 | coding | upstream | 53731 | 72210976 ~ 72225125 (-) |
| LOC110499807 | lsm8 | coding | upstream | 108445 | 72265690 ~ 72269495 (-) |
| LOC110490622 | LOC106595912 | coding | upstream | 113933 | 72271178 ~ 72281002 (-) |
| LOC110490625 | LOC106596128 | coding | upstream | 149621 | 72306866 ~ 72315261 (-) |
| G1324466 | NA | non-coding | downstream | 450 | 72155251 ~ 72156144 (-) |
| G1324463 | NA | non-coding | downstream | 2081 | 72154295 ~ 72154513 (-) |
| G1324461 | NA | non-coding | downstream | 2737 | 72153564 ~ 72153857 (-) |
| G1324437 | NA | non-coding | downstream | 49409 | 72103827 ~ 72107185 (-) |
| G1324378 | NA | non-coding | downstream | 134831 | 72020935 ~ 72021763 (-) |
| G1324469 | NA | non-coding | upstream | 3832 | 72161077 ~ 72161395 (-) |
| G1324482 | NA | non-coding | upstream | 24450 | 72181695 ~ 72182173 (-) |
| G1324484 | NA | non-coding | upstream | 35832 | 72193077 ~ 72193418 (-) |
| G1324487 | NA | non-coding | upstream | 44270 | 72201515 ~ 72201744 (-) |
| G1323296 | LOC106609674 | other | downstream | 918748 | 71202500 ~ 71237846 (-) |
| G1323207 | NA | other | downstream | 1117072 | 71025251 ~ 71039522 (-) |
| LOC110490645 | LOC106576589 | other | downstream | 1611374 | 70543356 ~ 70547418 (-) |
| G1324464 | typh | other | upstream | 83303 | 72240548 ~ 72260352 (-) |
| G1324512 | NA | other | upstream | 178115 | 72335360 ~ 72336984 (-) |
| G1324569 | NA | other | upstream | 250176 | 72407421 ~ 72407769 (-) |
| G1324604 | NA | other | upstream | 323160 | 72480405 ~ 72481169 (-) |
