G1324497


Basic Information

Item Value
gene id G1324497
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 72232793 ~ 72234586 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1512188
gagagagatagagactgtaCCTGTGGATGGATCTGTGTTTCACTTCCATTTCCAAACAGCAGTGTGCTGAATCCTGAGATGGCAGGACAGTCCGTGGTGTTGAAACAGGAACAGGGATACACCTCTATCAGACTGTTGTTCTTAATGAACATGTTGCTCTGCCAGTCATTAGGACTCTGCATACCACAGCAgtgcccctacacacacacacacacacacacacacacacaactggtcAGTTCGGTCTCGCCTCATCTTCACGTTTGATGTGGACCATGTTTCACAATTGCTGTCATACATACATAGCGCTGTACATTATCCAGAAGCTTCCAATGTCGTTGATTGTCAGGGTTTGTTCCATATTCAGTGATGATCTTATCCACTTCTATTTTCATCTTAGATGTGATCTGTCAGCGCAAaacacatgtctgtcttactgtctgtctgtctgtctgtctgtctctgtgtagaaaCACAGCAGTTATcatagtactgtctgtctgtctctgtgtagaaaCAAAGCAGTTATcatagtactgtctgtctgtctgtctgtctctgtgtagaaaCACAGCAGTTATcatagtactgtctgtctgtctctgtgtagaaaCACAGCAGTTATcatagtactgtctgtctgtctctgtgtagaaaCAAAGCAGTTATCATAGTACTATGCAACAACATGTTAATACAGCCCATTTTCTCTGAGATAATTAATGCTTGGTCCTGGACATACCTTTCCATGATTTAACAAAATGATGAAGATGACAAACAGCTGACCAAGGACGATGCAGATCAGGAAGCCCATGTACtgagaggaaagacagagagttGACTAAAACCAGTTAGGTCACCACAAACACTACACTAGGAGCTTAaagatgacgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgatgcgcgggtcagctgtttgttccaaCAAGCTCTCACACCAGAATCATACGTTTGTCCAAAAACATCACATTTCAAAGGTTatactatacagtggggcaaaacag
>TU1512189
gagagagatagagactgtaCCTGTGGATGGATCTGTGTTTCACTTCCATTTCCAAACAGCAGTGTGCTGAATCCTGAGATGGCAGGACAGTCCGTGGTGTTGAAACAGGAACAGGGATACACCTCTATCAGACTGTTGTTCTTAATGAACATGTTGCTCTGCCAGTCATTAGGACTCTGCATACCACAGCAgtgcccctacacacacacacacacacacacacacacacaactggtcAGTTCGGTCTCGCCTCATCTTCACGTTTGATGTGGACCATGTTTCACAATTGCTGTCATACATACATAGCGCTGTACATTATCCAGAAGCTTCCAATGTCGTTGATTGTCAGGGTTTGTTCCATATTCAGTGATGATCTTATCCACTTCTATTTTCATCTTAGATGTGATCTGTCAGCGCAAaacacatgtctgtctgtctgtctgtctgtctgtctgtctCTTTCCATGATTTAACAAAATGATGAAGATGACAAACAGCTGACCAAGGACGATGCAGATCAGGAAGCCCATGTACtgagaggaaagacagagagttGACTAAAACCAGTTAGGTCACCACAAACACTACACTAGGAGCTTAaagatgacgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgatgcgcgggtcagctgtttgttccaaCAAGCTCTCACACCAGAATCATACGTTTGTCCAAAAACATCACATTTCAAAGGTTatactatacagtggggcaaaacag

Function

NR:

description
CD82 antigen-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1512188 False 1044 lncRNA 0.43 3 72232793 72234586
TU1512189 True 760 lncRNA 0.45 3 72232793 72234586

Neighbor

gene id symbol gene type direction distance location
LOC110499794 LOC106609728 coding downstream 7668 72210976 ~ 72225125 (-)
LOC110490626 LOC106576575 coding downstream 39984 72162661 ~ 72192809 (-)
LOC110500989 LOC106576674 coding downstream 81797 72022817 ~ 72150996 (-)
LOC110490787 LOC106593403 coding downstream 215745 71984728 ~ 72017048 (-)
LOC118938840 LOC106576579 coding downstream 309530 71841725 ~ 71923263 (-)
LOC110499807 lsm8 coding upstream 31104 72265690 ~ 72269495 (-)
LOC110490622 LOC106595912 coding upstream 36592 72271178 ~ 72281002 (-)
LOC110490625 LOC106596128 coding upstream 72280 72306866 ~ 72315261 (-)
fgl2a fgl2 coding upstream 186983 72421569 ~ 72426957 (-)
LOC110531900 LOC106576463 coding upstream 247353 72481939 ~ 72493287 (-)
G1324489 NA non-coding downstream 27060 72203864 ~ 72205733 (-)
G1324487 NA non-coding downstream 31049 72201515 ~ 72201744 (-)
G1324484 NA non-coding downstream 39375 72193077 ~ 72193418 (-)
G1324482 NA non-coding downstream 50620 72181695 ~ 72182173 (-)
G1324499 NA non-coding upstream 1021 72235607 ~ 72260832 (-)
G1324498 NA non-coding upstream 1479 72236065 ~ 72261291 (-)
G1324465 typh non-coding upstream 5855 72240441 ~ 72255872 (-)
G1324464 typh non-coding upstream 5962 72240548 ~ 72260352 (-)
G1324502 NA non-coding upstream 27404 72261990 ~ 72262476 (-)
G1323296 LOC106609674 other downstream 994947 71202500 ~ 71237846 (-)
G1323207 NA other downstream 1193271 71025251 ~ 71039522 (-)
G1324512 NA other upstream 100774 72335360 ~ 72336984 (-)
G1324569 NA other upstream 172835 72407421 ~ 72407769 (-)
G1324604 NA other upstream 245819 72480405 ~ 72481169 (-)

Expression


Co-expression Network