G1324498


Basic Information

Item Value
gene id G1324498
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 72236065 ~ 72261291 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1512190
AGGCCTATACCCATAACATCACTTACGCCACATCTCACAAACAGAATGCTACTCTGTATGTATAAAACCCACCTGTGTCACTCAAGATAACcagaagagggtgccattttgaaGAATCAAGAAATCCCATTTTGAAGATTTTAATGTGTAATTTACAGACAGTCAATCACTTATCACCAAGGTCAGGCATCAGTCAATGATGGCACTGTGAAACTCACTGAAACACCTCGAGGCAGCGCTCTTAGCGCTGTTCGTCTGCAGACATAACAACTGTCTTGTGAAATAAAAAGGGATTTAAAAGTTGTTTGTATTAGTCAACGGTGGAGTCGGCTTGCAGTTTCAAAATGGTGGTACCTTTCTTTATGTCTACATTTCCAAGTAACTGTTCAGGCTGACCAGTACAGTACACAACTATTCACACAAGGTGAGGCTGACCAGTTAGGGCTGATCGGGTCATTAAGCCATAAACAGTAAAAAACAATGGAAAACAATGGAAAAAGATTGTTCTCATTGTCAGCAGAAAACCATCTTTAATAGAAGGCCTGTGTGGCTGAAAGCGCTGAACTGAGCTTTTAGAATTTGAGCAATTCCAGTggcggctggtgggaggagctacaggagg
>TU1512191
GAAGAGGGTGCCATTGTGAAGAATCAATACATCTAATTCAGAATGCCTAATTTACAGACAATCAATCACTTATCACCAATGTCAGGCATCAGTCAATGATGGCACTGTGAAACTCACTGAAACACCTCGAGGCAGCGCTCTTAGCGCTGTTCGTCTGCAGACATAACAACTGTCTTGTGAAATAAAAAGGGATTTAAAAGTTGTTTGTATTAGTCAACGGTGGAGTCGGCTTGCAGTTTCAAAATGGTGGTACCTTTCTTTATGTCTACATTTCCAAGTAACTGTTCAGGCTGACCAGTACAGTACACAACTATTCACACAAGGTGAGGCTGACCAGTTAGGGCTGATCGGGTCATTAAGCCATAAACAGTAAAAAACAATGGAAAACAATGGAAAAAGATTGTTCTCATTGTCAGCAGAAAACCATCTTTAATAGAAGGCCTGTGTGGCTGAAAGCGCTGAACTGAGCTTTTAGAATTTGAGCAATTCCAGTggcggctggtgggaggagctacaggagg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1512190 False 622 lncRNA 0.42 2 72236065 72236725
TU1512191 True 521 lncRNA 0.42 3 72236065 72261291

Neighbor

gene id symbol gene type direction distance location
LOC110499794 LOC106609728 coding downstream 10940 72210976 ~ 72225125 (-)
LOC110490626 LOC106576575 coding downstream 43256 72162661 ~ 72192809 (-)
LOC110500989 LOC106576674 coding downstream 85069 72022817 ~ 72150996 (-)
LOC110490787 LOC106593403 coding downstream 219017 71984728 ~ 72017048 (-)
LOC118938840 LOC106576579 coding downstream 312802 71841725 ~ 71923263 (-)
LOC110499807 lsm8 coding upstream 4399 72265690 ~ 72269495 (-)
LOC110490622 LOC106595912 coding upstream 9887 72271178 ~ 72281002 (-)
LOC110490625 LOC106596128 coding upstream 45575 72306866 ~ 72315261 (-)
fgl2a fgl2 coding upstream 160278 72421569 ~ 72426957 (-)
LOC110531900 LOC106576463 coding upstream 220648 72481939 ~ 72493287 (-)
G1324497 NA non-coding downstream 1479 72232793 ~ 72234586 (-)
G1324489 NA non-coding downstream 30332 72203864 ~ 72205733 (-)
G1324487 NA non-coding downstream 34321 72201515 ~ 72201744 (-)
G1324484 NA non-coding downstream 42647 72193077 ~ 72193418 (-)
G1324482 NA non-coding downstream 53892 72181695 ~ 72182173 (-)
G1324502 NA non-coding upstream 699 72261990 ~ 72262476 (-)
G1324541 LOC106592662 non-coding upstream 84740 72346031 ~ 72347252 (-)
G1324550 NA non-coding upstream 100922 72362213 ~ 72362977 (-)
G1324558 NA non-coding upstream 120678 72381969 ~ 72382259 (-)
G1324560 NA non-coding upstream 127999 72389290 ~ 72389526 (-)
G1323296 LOC106609674 other downstream 998219 71202500 ~ 71237846 (-)
G1323207 NA other downstream 1196543 71025251 ~ 71039522 (-)
G1324512 NA other upstream 74069 72335360 ~ 72336984 (-)
G1324569 NA other upstream 146130 72407421 ~ 72407769 (-)
G1324604 NA other upstream 219114 72480405 ~ 72481169 (-)
LOC110531910 gsap other upstream 253379 72500414 ~ 72533138 (-)

Expression


Co-expression Network