G1324512


Basic Information

Item Value
gene id G1324512
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 72335360 ~ 72336984 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1512208
GAACGTAAAATGATATTATGAGTATGTACTAcagtagcctgggtgccagtctgttgaGTGAACATTCCACCCCTTGTACTCCGTGTCACATGCCAAATGTTTAGCATGACaaggagtggcaaggagtggaatgatagctaaaGTGGTACAACCACTGGTCTAATCTCATACAGTTTAGAGTCCTTCATTACGTCTTCATTGTTTTAATCAACTTTTCCCCCTGTGTCAGACTGTGTTGAGtgggaagaaagagaaagacaagttgaagaaacatgagaagggggagaggaagagaaaggaagcagagacaaagacagagaaggCAGAaccagaagaggagagagaaagagctgagGGAGTGTGAAAgacaggaggatgagaggagagaacaggaggaaaagaggaagagagaggaggatgagaggagagaacaggaggaaaagaggaagagaggaggatgagaggagagaacaggaggaaaagaggaagagagaggaggatgagaggagagaacaggaggaaaagaggaagagagaggaggatgagaggagagaacaggatgaaaagaggaagagagagaaggatgagaggagagcacaggatgaaaagaggaagagaggaggatgagaggagagaacaggatgaaaagaggaagagaggaggatgagaggagagaacaggaggaaaagaggaagagaggaggatgagaggagagaacaggatgaaaagaggaagagaggaggatgagaggagagaacaggatgaaaagaggaagagaggaggatgagaggagagaacaggaggaaaaGAGGAATATTTTTAAGAGATGTTGGTTGTCGAATAAAAGGAACATAATGTTAAAAGATGCTTGTCCCTTTATTCAAGACACTGTAACCAACACTGAGGCACTACAATGGTTAAATGGTTAATCAGTTGAACAGTAATACTTTGGACAACACAGTAGAGATGTCTAATGTCTAATAATGTCCTGAGTTGTCCTTTCATGTGTGTTATGAGTATGTACAAAATATGGATGCAttgctagcctgatcccagatatGTTTGTGGTCTGGCCAATGACAACTCCATTGCTGTCATTGCCAAGCCAACTCTTTGTCACCCATTGTCATGTTTGGCTTGACACAAATGAGTGACCGGAGTTgtcatgatggcacaaacagactggcactcaggctagtgCATTGAGTATCCTTCATAAGAGGACCATTTCATGTCAGACACTCTCTGCTGTGTCACACAGCTCTCTGTATTGAGGTGGTTGAAAGGTGAAGATCACAGGTGGCACATCAACCTTTCTTCTCATCTGGCAGAGTATTGTGATGGCCAGGACAACTCCAACA
>TU1512209
GAACGTAAAATGATATTATGAGTATGTACTAcagtagcctgggtgccagtctgttgaGTGAACATTCCACCCCTTGTACTCCGTGTCACATGCCAAATGTTTAGCATGACaaggagtggcaaggagtggaatgatagctaaaGTGGTACAACCACTGGTCTAATCTCATACAGTTTAGAGTCCTTCATTACGTCTTCATTGTTTTAATCAACTTTTCCCCCTGTGTCAGACTGTGTTGAGtgggaagaaagagaaagacaagttgaagaaacatgagaagggggagaggaagagaaaggaagcagagacaaagacagagaaggCAGAaccagaagaggagagagaaagagctgagGGAGTGTGAAAgacaggaggatgagaggagaaaacaggaggagaagagggtgaaacagggaaagaagagaggaagagaggaggatgagaggagagaacaggaggaaaagaggaagagagaggaggatgagaggagagaacaggatgaaaagaggagagagaaggatgagaggagagaacaggatgaaaagaggagagaggaggatgagaggagagaacaggatgaaaagaggaagagagagaaggatgagaggagagaacaggaggaaaagaggaagagagaggaggatgagaggagagaacaggaggaaaagaggaagagaggaggatgagaggagagaacaggaggaaaagaggaagagagaggaggatgagaggagagaacaggaggaaaagaggaagagagaggaggatgagaggagagaacaggatgaaaagaggaagagagagaaggatgagaggagagcacaggatgaaaagaggaagagaggaggatgagaggagagaacaggatgaaaagaggaagagaggaggatgagaggagagaacaggaggaaaagaggaagagaggaggatgagaggagagaacaggatgaaaagaggaagagaggaggatgagaggagagaacaggatgaaaagaggaagagaggaggatgagaggagagaacaggaggaaaaGAGGAATATTTTTAAGAGATGTTGGTTGTCGAATAAAAGGAACATAATGTTAAAAGATGCTTGTCCCTTTATTCAAGACACTGTAACCAACACTGAGGCACTACAATGGTTAAATGGTTAATCAGTTGAACAGTAATACTTTGGACAACACAGTAGAGATGTCTAATGTCTAATAATGTCCTGAGTTGTCCTTTCATGTGTGTTATGAGTATGTACAAAATATGGATGCAttgctagcctgatcccagatatGTTTGTGGTCTGGCCAATGACAACTCCATTGCTGTCATTGCCAAGCCAACTCTTTGTCACCCATTGTCATGTTTGGCTTGACACAAATGAGTGACCGGAGTTgtcatgatggcacaaacagactggcactcaggctagtgCATTGAGTATCCTTCATAAGAGGACCATTTCATGTCAGACACTCTCTGCTGTGTCACACAGCTCTCTGTATTGAGGTGGTTGAAAGGTGAAGATCACAGGTGGCACATCAACCTTTCTTCTCATCTGGCAGAGTATTGTGATGGCCAGGACAACTCCAACA

Function

NR:

description
uncharacterized protein LOC110515610 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1512208 False 1361 TUCP 0.45 2 72335360 72336984
TU1512209 True 1586 TUCP 0.45 2 72335360 72336984

Neighbor

gene id symbol gene type direction distance location
LOC110490625 LOC106596128 coding downstream 20099 72306866 ~ 72315261 (-)
LOC110490622 LOC106595912 coding downstream 54358 72271178 ~ 72281002 (-)
LOC110499807 lsm8 coding downstream 65865 72265690 ~ 72269495 (-)
LOC110499794 LOC106609728 coding downstream 110235 72210976 ~ 72225125 (-)
LOC110490626 LOC106576575 coding downstream 142551 72162661 ~ 72192809 (-)
fgl2a fgl2 coding upstream 84585 72421569 ~ 72426957 (-)
LOC110531900 LOC106576463 coding upstream 144955 72481939 ~ 72493287 (-)
LOC110531910 gsap coding upstream 163430 72500414 ~ 72533138 (-)
LOC118938847 NA coding upstream 254678 72591662 ~ 72592173 (-)
LOC110499730 LOC106609820 coding upstream 398032 72735016 ~ 72737438 (-)
G1324502 NA non-coding downstream 72884 72261990 ~ 72262476 (-)
G1324498 NA non-coding downstream 74069 72236065 ~ 72261291 (-)
G1324499 NA non-coding downstream 74528 72235607 ~ 72260832 (-)
G1324464 typh non-coding downstream 75008 72240548 ~ 72260352 (-)
G1324465 typh non-coding downstream 79488 72240441 ~ 72255872 (-)
G1324541 LOC106592662 non-coding upstream 9047 72346031 ~ 72347252 (-)
G1324550 NA non-coding upstream 25229 72362213 ~ 72362977 (-)
G1324558 NA non-coding upstream 44985 72381969 ~ 72382259 (-)
G1324560 NA non-coding upstream 52306 72389290 ~ 72389526 (-)
G1324561 LOC106599346 non-coding upstream 53135 72390119 ~ 72391119 (-)
LOC110500989 LOC106576674 other downstream 184423 72022817 ~ 72150996 (-)
LOC118938840 LOC106576579 other downstream 412452 71841725 ~ 71923263 (-)
G1323296 LOC106609674 other downstream 1097514 71202500 ~ 71237846 (-)
G1324569 NA other upstream 70437 72407421 ~ 72407769 (-)
G1324604 NA other upstream 143421 72480405 ~ 72481169 (-)
G1324805 NA other upstream 568465 72905449 ~ 72906351 (-)

Expression


Co-expression Network