G1324046


Basic Information

Item Value
gene id G1324046
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 72414751 ~ 72414969 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1511563
TCTGATACTGTCTCAAAGACCCTACTACAGTAGTCACAGGACAGAGGATGAAGTCTATCTATGAACATTTATGTTCAGTACAGGGCCACTAAAAAAGTCTCTCCCAAAATGAGAATCCTGCTTCACGGGACCTACCAAATCCTACTAcccctttaacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1511563 True 219 lncRNA 0.45 1 72414751 72414969

Neighbor

gene id symbol gene type direction distance location
LOC110518729 LOC106599346 coding upstream 10113 72381871 ~ 72404638 (+)
LOC110516399 LOC106592662 coding upstream 67835 72340081 ~ 72346916 (+)
LOC118938846 tsn8 coding upstream 78888 72322986 ~ 72335863 (+)
LOC110490623 LOC106597683 coding upstream 118447 72287164 ~ 72370434 (+)
LOC118938844 typh coding upstream 158182 72251903 ~ 72256569 (+)
LOC110531894 LOC106598741 coding downstream 1081 72416050 ~ 72481441 (+)
LOC110515111 LOC106561326 coding downstream 136148 72551117 ~ 72734470 (+)
LOC110490361 LOC106609821 coding downstream 327224 72742193 ~ 72850175 (+)
LOC110499728 NA coding downstream 411544 72826513 ~ 72829520 (+)
LOC118938849 LOC106609835 coding downstream 757251 73172193 ~ 73254659 (+)
G1324044 NA non-coding upstream 1296 72413213 ~ 72413455 (+)
G1324039 NA non-coding upstream 12733 72401741 ~ 72402018 (+)
G1324036 NA non-coding upstream 16898 72397466 ~ 72397853 (+)
G1324033 NA non-coding upstream 25512 72388929 ~ 72389239 (+)
G1324024 NA non-coding upstream 38480 72375993 ~ 72376271 (+)
G1324049 NA non-coding downstream 6605 72421574 ~ 72456551 (+)
G1324070 NA non-coding downstream 66981 72481950 ~ 72482708 (+)
G1324076 NA non-coding downstream 74428 72489397 ~ 72501480 (+)
G1324073 gsap non-coding downstream 89371 72504340 ~ 72509190 (+)
G1324072 LOC106594049 non-coding downstream 95984 72510953 ~ 72519481 (+)
G1323962 NA other upstream 223588 72190423 ~ 72191163 (+)
G1322763 NA other upstream 1477606 70936225 ~ 70937145 (+)
G1322725 NA other upstream 1566807 70843945 ~ 70847944 (+)
G1322161 NA other upstream 2511093 69900944 ~ 69903658 (+)
G1322119 NA other upstream 2614889 69798196 ~ 69799862 (+)
G1324156 LOC106576365 other downstream 438597 72853566 ~ 72856022 (+)
G1324195 NA other downstream 445851 72860820 ~ 72865809 (+)
G1324240 NA other downstream 490741 72905710 ~ 72906089 (+)

Expression


Co-expression Network