G1324084


Basic Information

Item Value
gene id G1324084
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 72524516 ~ 72524964 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1511602
gccatcatcaacacagttacactggggccatcatcaacacagttacactggggccatcatcaacacagttacactggggccatcatcaacacctgtaacacagttacactggggccatcatcaacacagttacactggggccatcatcaacacagttacactggggccatcatcaacacctgtaacacagttatactggggccatcatcaacacagttacactggggccatcatcaacacagttacactggggccatcatcaacacctgtaacacagttatactggggccatcatcaacacagttacactggggccatcatcaacacagttacactggggccatcatcaacacctgtaacacagttacactgaggccatcatcaacacctgtaacacagttatactggggccatcatcaacacagttatactggggccatcatcaacac

Function

NR:

description
PREDICTED: uncharacterized protein LOC106593258

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1511602 True 449 lncRNA 0.48 1 72524516 72524964

Neighbor

gene id symbol gene type direction distance location
LOC110531894 LOC106598741 coding upstream 43075 72416050 ~ 72481441 (+)
LOC110518729 LOC106599346 coding upstream 119878 72381871 ~ 72404638 (+)
LOC110516399 LOC106592662 coding upstream 177600 72340081 ~ 72346916 (+)
LOC118938846 tsn8 coding upstream 188653 72322986 ~ 72335863 (+)
LOC110490623 LOC106597683 coding upstream 228212 72287164 ~ 72370434 (+)
LOC110515111 LOC106561326 coding downstream 26153 72551117 ~ 72734470 (+)
LOC110490361 LOC106609821 coding downstream 217229 72742193 ~ 72850175 (+)
LOC110499728 NA coding downstream 301549 72826513 ~ 72829520 (+)
LOC118938849 LOC106609835 coding downstream 647256 73172193 ~ 73254659 (+)
LOC110517131 LOC105024897 coding downstream 733559 73258523 ~ 73536948 (+)
G1324072 LOC106594049 non-coding upstream 5035 72510953 ~ 72519481 (+)
G1324073 gsap non-coding upstream 15326 72504340 ~ 72509190 (+)
G1324076 NA non-coding upstream 23036 72489397 ~ 72501480 (+)
G1324070 NA non-coding upstream 41808 72481950 ~ 72482708 (+)
G1324049 NA non-coding upstream 67965 72421574 ~ 72456551 (+)
G1324085 NA non-coding downstream 580 72525544 ~ 72526168 (+)
G1324108 NA non-coding downstream 30167 72555131 ~ 72555732 (+)
G1324112 NA non-coding downstream 39461 72564425 ~ 72564952 (+)
G1324115 NA non-coding downstream 43284 72568248 ~ 72568574 (+)
G1324131 NA non-coding downstream 68684 72593648 ~ 72593951 (+)
G1323962 NA other upstream 333353 72190423 ~ 72191163 (+)
G1322763 NA other upstream 1587371 70936225 ~ 70937145 (+)
G1322725 NA other upstream 1676572 70843945 ~ 70847944 (+)
G1322161 NA other upstream 2620858 69900944 ~ 69903658 (+)
G1324156 LOC106576365 other downstream 328602 72853566 ~ 72856022 (+)
G1324195 NA other downstream 335856 72860820 ~ 72865809 (+)
G1324240 NA other downstream 380746 72905710 ~ 72906089 (+)

Expression


Co-expression Network