G1324646


Basic Information

Item Value
gene id G1324646
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 72590029 ~ 72591064 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1512377
CAGGTAGAGAAGAGGTTAGTGTCCTGTAAgatgtcctccatgttgttcaggtagagaagaggttagtgtcctccatgttgttcaggtagagaagaggttagtgtcctccatgttgttcaggtagagaagaggttagtgtcctccatgttgttcaggtagagaagaggttagtgtcctccatgttgttcaggtagagaagagggggggggggggggggggggggggggggggggcttggatgCTATGTTGTGGGGAAGAAGGGCCAagaggatgtgtgtgttgtgagagGCTGTGGTCAGAGTTTATTTGTCCAGTCCACTCAGAGCTCCTCTGGCCTGTAGCATTAATGTGATCCTGTCCAGTAATATCCATCTATCCCCCTGACTGTAAGAACCAttagagaggacacacacagcacactagacacacagcacagtacactacacacacagcacacagcacactacacacagtacactacacactacacacagcatTACATACAGGGCAGTATGTCTTTATAGCGGTTCTTCTTCACATTCCCTTCCTGCTCCCCGACGTTGGTGGGGTAGATCTTCTCTGTCCTGTATTTGGTCGATAATCTTCGTAATCTCTGCAGGGAGAAAAAACAACAAGAGAGAAAATGTTATTCattctgtgtttttctgtctccTAAAGAAAGACATGTTGTAGAGAAGGAATACCCAACAacaccctatttcctttatagtgcactacttttgaccagagtcctataaagggaatagggaaccatttatagtgccctacttttgaccagagtcctatgaagggaatagggaaccatttatagtgcactacttttgaccagagtcctataaagggaatagggaaccatttaTAGTGTACCacctttgaccagagtcctatgaagggaatagggaaccatttatag

Function

NR:

description
PREDICTED: tyrosine-protein phosphatase non-receptor type 12-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1512377 True 934 lncRNA 0.46 2 72590029 72591064

Neighbor

gene id symbol gene type direction distance location
LOC110531910 gsap coding downstream 56891 72500414 ~ 72533138 (-)
LOC110531900 LOC106576463 coding downstream 96742 72481939 ~ 72493287 (-)
fgl2a fgl2 coding downstream 163072 72421569 ~ 72426957 (-)
LOC110490625 LOC106596128 coding downstream 274768 72306866 ~ 72315261 (-)
LOC110490622 LOC106595912 coding downstream 309027 72271178 ~ 72281002 (-)
LOC118938847 NA coding upstream 598 72591662 ~ 72592173 (-)
LOC110499730 LOC106609820 coding upstream 143952 72735016 ~ 72737438 (-)
LOC110490677 LOC106576365 coding upstream 263958 72855022 ~ 72916247 (-)
LOC118938848 NA coding upstream 319040 72910104 ~ 72914835 (-)
LOC110490803 LOC106591178 coding upstream 368152 72959216 ~ 73142970 (-)
G1324620 NA non-coding downstream 35669 72553906 ~ 72554360 (-)
G1324608 NA non-coding downstream 61394 72528325 ~ 72528635 (-)
G1324606 NA non-coding downstream 92748 72485372 ~ 72497281 (-)
G1324605 NA non-coding downstream 108567 72481211 ~ 72481462 (-)
G1324616 NA non-coding upstream 7879 72598943 ~ 72599533 (-)
G1324656 NA non-coding upstream 21498 72612562 ~ 72613167 (-)
G1324658 NA non-coding upstream 23344 72614408 ~ 72614907 (-)
G1324661 NA non-coding upstream 32476 72623540 ~ 72623863 (-)
G1324662 NA non-coding upstream 34879 72625943 ~ 72627356 (-)
G1324604 NA other downstream 108860 72480405 ~ 72481169 (-)
G1324569 NA other downstream 182260 72407421 ~ 72407769 (-)
G1324512 NA other downstream 253045 72335360 ~ 72336984 (-)
G1324805 NA other upstream 314385 72905449 ~ 72906351 (-)
G1325752 NA other upstream 1084274 73675338 ~ 73677653 (-)
G1325780 NA other upstream 1143617 73734681 ~ 73735097 (-)
G1325863 LOC106584099 other upstream 1411383 74002447 ~ 74002749 (-)
LOC110513406 LOC106576618 other upstream 1577079 74167198 ~ 74213128 (-)

Expression


Co-expression Network