Gene
RNA
| Item | Value |
|---|---|
| gene id | G1324616 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 72598943 ~ 72599533 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: tyrosine-protein phosphatase non-receptor type 12-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1512344 | True | 404 | lncRNA | 0.49 | 2 | 72598943 | 72599533 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118938847 | NA | coding | downstream | 6770 | 72591662 ~ 72592173 (-) |
| LOC110531910 | gsap | coding | downstream | 65805 | 72500414 ~ 72533138 (-) |
| LOC110531900 | LOC106576463 | coding | downstream | 105656 | 72481939 ~ 72493287 (-) |
| fgl2a | fgl2 | coding | downstream | 171986 | 72421569 ~ 72426957 (-) |
| LOC110490625 | LOC106596128 | coding | downstream | 283682 | 72306866 ~ 72315261 (-) |
| LOC110499730 | LOC106609820 | coding | upstream | 135483 | 72735016 ~ 72737438 (-) |
| LOC110490677 | LOC106576365 | coding | upstream | 255489 | 72855022 ~ 72916247 (-) |
| LOC118938848 | NA | coding | upstream | 310571 | 72910104 ~ 72914835 (-) |
| LOC110490803 | LOC106591178 | coding | upstream | 359683 | 72959216 ~ 73142970 (-) |
| LOC118938934 | LOC106594503 | coding | upstream | 737492 | 73337025 ~ 73338361 (-) |
| G1324646 | NA | non-coding | downstream | 7879 | 72590029 ~ 72591064 (-) |
| G1324620 | NA | non-coding | downstream | 44583 | 72553906 ~ 72554360 (-) |
| G1324608 | NA | non-coding | downstream | 70308 | 72528325 ~ 72528635 (-) |
| G1324606 | NA | non-coding | downstream | 101662 | 72485372 ~ 72497281 (-) |
| G1324656 | NA | non-coding | upstream | 13029 | 72612562 ~ 72613167 (-) |
| G1324658 | NA | non-coding | upstream | 14875 | 72614408 ~ 72614907 (-) |
| G1324661 | NA | non-coding | upstream | 24007 | 72623540 ~ 72623863 (-) |
| G1324662 | NA | non-coding | upstream | 26410 | 72625943 ~ 72627356 (-) |
| G1324665 | NA | non-coding | upstream | 34000 | 72633533 ~ 72634566 (-) |
| G1324604 | NA | other | downstream | 117774 | 72480405 ~ 72481169 (-) |
| G1324569 | NA | other | downstream | 191174 | 72407421 ~ 72407769 (-) |
| G1324512 | NA | other | downstream | 261959 | 72335360 ~ 72336984 (-) |
| G1324805 | NA | other | upstream | 305916 | 72905449 ~ 72906351 (-) |
| G1325752 | NA | other | upstream | 1075805 | 73675338 ~ 73677653 (-) |
| G1325780 | NA | other | upstream | 1135148 | 73734681 ~ 73735097 (-) |
| G1325863 | LOC106584099 | other | upstream | 1402914 | 74002447 ~ 74002749 (-) |
| LOC110513406 | LOC106576618 | other | upstream | 1568610 | 74167198 ~ 74213128 (-) |
